RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 KRT87PA6NCN2 255 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 EPHX1P07099 455 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 ITGB6P18564 788 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 RARRES1P49788 294 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-203ENST00000434735 USP10Q14694 798 aaKnown RBP12.57□□□□□ -0.4
UBE3B-203ENST00000434735 RAET1GQ6H3X3 334 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 STX19Q8N4C7 294 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 ELMO3Q96BJ8 720 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 ARHGEF26Q96DR7 871 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 TRIM55Q9BYV6 548 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 ALG13Q9NP73 1137 aaKnown RBP12.57□□□□□ -0.4
UBE3B-203ENST00000434735 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
UBE3B-203ENST00000434735 DYRK1BQ9Y463 629 aa12.57□□□□□ -0.4
UBE3B-203ENST00000434735 RNASEH2AO75792 299 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 PTPN2P17706 415 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 SLC9A1P19634 815 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 PTGER2P43116 358 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 RENBPP51606 427 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 RCOR2Q8IZ40 523 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 KAZALD1Q96I82 304 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 TGS1Q96RS0 853 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 KIF2CQ99661 725 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 KIF17Q9P2E2 1029 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 EIF2S1P05198 315 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 POLR2LP62875 67 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 MTM1Q13496 603 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 ZSCAN26Q16670 478 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 DNAJC1Q96KC8 554 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 FMO2Q99518 471 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 TSPAN16Q9UKR8 245 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 UBXN8O00124 270 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 POLBP06746 335 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 RARGP13631 454 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 MSL3Q8N5Y2 521 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 MTMR9Q96QG7 549 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 WNT8AQ9H1J5 351 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 PSD3Q9NYI0 1048 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 TPX2Q9ULW0 747 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 PTPN3P26045 913 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 BOP1Q14137 746 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 FLOT2Q14254 428 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 SHROOM1Q2M3G4 852 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 TIGD5Q53EQ6 642 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 PIP4K2CQ8TBX8 421 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 TIFAQ96CG3 184 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 GPR20Q99678 358 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 C2orf49Q9BVC5 232 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 MCOLN1Q9GZU1 580 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 ARHGAP26Q9UNA1 814 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 DIS3Q9Y2L1 958 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 RPL17P18621 184 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 GEMP55040 296 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 NCALDP61601 193 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 FAXCQ5TGI0 409 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 KREMEN2Q8NCW0 462 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 ST13P5Q8NFI4 369 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 OR14C36Q8NHC7 312 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 CLIP3Q96DZ5 547 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 CYP3A43Q9HB55 503 aa12.56□□□□□ -0.4
UBE3B-203ENST00000434735 APOBEC2Q9Y235 224 aaKnown RBP12.56□□□□□ -0.4
UBE3B-203ENST00000434735 SYCE1LA8MT33 242 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 MTSS1O43312 755 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 KITP10721 976 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 EIF3BP55884 814 aaKnown RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 ZBTB17Q13105 803 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 CUL4AQ13619 759 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 PLPPR4Q7Z2D5 763 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 CALML6Q8TD86 181 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 TFB1MQ8WVM0 346 aaKnown RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 HERVK_113Q902F9 699 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 TMEM159Q96B96 161 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 KLHL29Q96CT2 875 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 RHBGQ9H310 441 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 MRPL40Q9NQ50 206 aaKnown RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 SPATA6Q9NWH7 488 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 SMARCAL1Q9NZC9 954 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 DNAJC16Q9Y2G8 782 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 CDC16Q13042 620 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 NUGGCQ68CJ6 796 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 PTAR1Q7Z6K3 402 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-203ENST00000434735 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 TM6SF2Q9BZW4 377 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 NKX2-4Q9H2Z4 354 aa12.55□□□□□ -0.4
UBE3B-203ENST00000434735 RIPK3Q9Y572 518 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms