RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PCDH18Q9HCL0 1135 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 DPP3Q9NY33 737 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 RBPJLQ9UBG7 517 aa12.27□□□□□ -0.44
CD44-209ENST00000433892 UGT1A9O60656 530 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 SLC25A27O95847 323 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 OSBPP22059 807 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 CCNG1P51959 295 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 RBP5P82980 135 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 CRYMQ14894 314 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 BOLA3Q53S33 107 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 PPP1R26Q5T8A7 1209 aaPredicted RBP12.27□□□□□ -0.45
CD44-209ENST00000433892 RFWD3Q6PCD5 774 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 OLFML1Q6UWY5 402 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 CCDC33Q8N5R6 958 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 MECRQ9BV79 373 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
CD44-209ENST00000433892 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 SLC13A1Q9BZW2 595 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 KLC2Q9H0B6 622 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 TLE6Q9H808 572 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 UGT1A7Q9HAW7 530 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 UGT1A10Q9HAW8 530 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 UGT1A8Q9HAW9 530 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 POPDC2Q9HBU9 364 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 FAM49BQ9NUQ9 324 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
CD44-209ENST00000433892 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 A0A0G2JLL6 359 aaPredicted RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 FAM237BA0A1B0GVD1 139 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 ADM5C9JUS6 153 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 TFE3P19532 575 aaPredicted RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 BMPR2Q13873 1038 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 PDK2Q15119 407 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 TAF11Q15544 211 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 FAM187BQ17R55 369 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 PRRT2Q7Z6L0 340 aaPredicted RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 TTC7BQ86TV6 843 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 ACOT1Q86TX2 421 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 SKA1Q96BD8 255 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 RTP4Q96DX8 246 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 PTCD3Q96EY7 689 aaKnown RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 MIS12Q9H081 205 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 PNPLA8Q9NP80 782 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 SMYD2Q9NRG4 433 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 ITGA11Q9UKX5 1188 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 CCDC22O60826 627 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 KRT37O76014 449 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 TGDSO95455 350 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 SNRPAP09012 282 aaKnown RBP12.26□□□□□ -0.45
CD44-209ENST00000433892 MYL2P10916 166 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 TGM2P21980 687 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 SDC4P31431 198 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 CDK16Q00536 496 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 WASHC2DQ5SRD0 308 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 KHSRPQ92945 711 aaKnown RBP eCLIP12.26□□□□□ -0.45
CD44-209ENST00000433892 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 ACAP3Q96P50 834 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 BTBD10Q9BSF8 475 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 MAGEB5Q9BZ81 275 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 MAD1L1Q9Y6D9 718 aa12.26□□□□□ -0.45
CD44-209ENST00000433892 BCLAF3A2AJT9 711 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 SLC15A5A6NIM6 579 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 HNRNPCL1O60812 293 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 ATXN1P54253 815 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 HDAC4P56524 1084 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 MRPS5P82675 430 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 ZNF484Q5JVG2 852 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 SLC9A4Q6AI14 798 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 DSTYKQ6XUX3 929 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 MOB2Q70IA6 237 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 ARMC2Q8NEN0 867 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 NSL1Q96IY1 281 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 LPIN3Q9BQK8 851 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 MRPL45Q9BRJ2 306 aaKnown RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 ARMCX1Q9P291 453 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 KIAA1257Q9ULG3 409 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 PLLPQ9Y342 182 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 SNX9Q9Y5X1 595 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 PAPPA2Q9BXP8 1791 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 CYB561D2O14569 222 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 PPEF2O14830 753 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 GYG2O15488 501 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 PAPSS1O43252 624 aaPredicted RBP12.25□□□□□ -0.45
CD44-209ENST00000433892 DNAJC6O75061 913 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 RFPL1O75677 317 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 GABBR2O75899 941 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 METTL18O95568 372 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 LGALS2P05162 132 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 ZNF286BP0CG31 522 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 CSH1P0DML2 217 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 CSH2P0DML3 217 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 PRKCHP24723 683 aa12.25□□□□□ -0.45
CD44-209ENST00000433892 SLC6A3Q01959 620 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms