RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SNX3O60493 162 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 SPAG6O75602 509 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 APOC2P02655 101 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 FAM163BP0C2L3 166 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TXNP10599 105 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 KRT3P12035 628 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 BRD2P25440 801 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 STIP1P31948 543 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 CHKAP35790 457 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 SKIV2L2P42285 1042 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ABL2P42684 1182 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MAGEA4P43358 317 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RAD23BP54727 409 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RPL7AP62424 266 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RAC1P63000 192 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 IFI35P80217 286 aaPredicted RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TFAMQ00059 246 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 OGDHQ02218 1023 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ARHGAP1Q07960 439 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 IFT88Q13099 833 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 SNX1Q13596 522 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 P3H1Q32P28 736 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF792Q3KQV3 632 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 DCAF4L1Q3SXM0 396 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 PTPN20Q4JDL3 420 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ANKRD20A8PQ5CZ79 823 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RNASEH2BQ5TBB1 312 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 EFCAB12Q6NXP0 572 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MAMDC4Q6UXC1 1216 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MFSD7Q6UXD7 560 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 CENPUQ71F23 418 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 XYLT1Q86Y38 959 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ZDHHC17Q8IUH5 632 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 PASD1Q8IV76 773 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 C1orf127Q8N9H9 656 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MAGEC3Q8TD91 643 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TEKT4Q8WW24 435 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TFAP2BQ92481 460 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MAML1Q92585 1016 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 APBB2Q92870 758 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ALKBH8Q96BT7 664 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RTP4Q96DX8 246 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TMEM176AQ96HP8 235 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 HHIPL1Q96JK4 782 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MAGEB18Q96M61 343 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RBM15Q96T37 977 aaKnown RBP eCLIP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TBCBQ99426 244 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 SELENOSQ9BQE4 189 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 INO80BQ9C086 356 aaPredicted RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 DNAI2Q9GZS0 605 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 RSAD1Q9HA92 442 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 BRD7Q9NPI1 651 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 ASNSD1Q9NWL6 643 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MORF4L1Q9UBU8 362 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 DNPEPQ9ULA0 475 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 BARX2Q9UMQ3 279 aaPredicted RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.78□□□□□ -1.16
COL17A1-204ENST00000433822 IVNS1ABPQ9Y6Y0 642 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MGAMO43451 1857 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 MCM3APO60318 1980 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 EVPLQ92817 2033 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 A0A1B0GUA9 196 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 TMEM120BA0PK00 339 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 CCT8L1PA6NM43 557 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 F8VP50 259 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 LRCH4O75427 683 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 RASSF9O75901 435 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 RNF8O76064 485 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 SUN1O94901 812 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 ACSL3O95573 720 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 LGALS2P05162 132 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 GSTA2P09210 222 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 SRGAP2CP0DJJ0 459 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 DESP17661 470 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 CD58P19256 250 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 KDELR1P24390 212 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 PSMA2P25787 234 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 PHBP35232 272 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 GPD2P43304 727 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 MAGEA6P43360 314 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 GCLCP48506 637 aaPredicted RBP7.77□□□□□ -1.17
COL17A1-204ENST00000433822 LIG3P49916 1009 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 ARSEP51690 589 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 ZNF143P52747 638 aaPredicted RBP7.77□□□□□ -1.17
COL17A1-204ENST00000433822 EPHA4P54764 986 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 RBP5P82980 135 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 CCDC15Q0P6D6 951 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 NOGQ13253 232 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 SNAPC2Q13487 334 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 TFDP2Q14188 446 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 PDK2Q15119 407 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 KYNUQ16719 465 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 LONRF1Q17RB8 773 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 KLHL38Q2WGJ6 581 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 WDR72Q3MJ13 1102 aa7.77□□□□□ -1.17
COL17A1-204ENST00000433822 FAM47CQ5HY64 1035 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms