RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PHKBQ93100 1093 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 TIFAQ96CG3 184 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 IQCDQ96DY2 449 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 SCAF8Q9UPN6 1271 aaKnown RBP4.03□□□□□ -1.76
CLK1-204ENST00000432425 HPSEQ9Y251 543 aa4.03□□□□□ -1.76
CLK1-204ENST00000432425 TTBK1Q5TCY1 1321 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 F8W8V4 182 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 BCAR3O75815 825 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 A1BGP04217 495 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 ADRA1DP25100 572 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 MCM5P33992 734 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 PLCD1P51178 756 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 EIF4A1P60842 406 aaKnown RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 DAG1Q14118 895 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 KCNB1Q14721 858 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 CLCA4Q14CN2 919 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 DAZAP2Q15038 168 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 CC2D1BQ5T0F9 858 aaKnown RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 MANEALQ5VSG8 457 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 CYB5RLQ6IPT4 315 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 USP49Q70CQ1 688 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 C16orf71Q8IYS4 520 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 KRT78Q8N1N4 520 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 FSTL5Q8N475 847 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 METTL25Q8N6Q8 603 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 LINC01465Q8N7H1 131 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 PNPLA1Q8N8W4 532 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 OSR1Q8TAX0 266 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 CUL5Q93034 780 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 ZDHHC12Q96GR4 267 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 HEYLQ9NQ87 328 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 TUBA8Q9NY65 449 aaPredicted RBP4.02□□□□□ -1.77
CLK1-204ENST00000432425 MAFFQ9ULX9 164 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 CAPN11Q9UMQ6 739 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 SLC27A6Q9Y2P4 619 aa4.02□□□□□ -1.77
CLK1-204ENST00000432425 IL18RAPO95256 599 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 TMEM225BP0DP42 221 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 SFPQP23246 707 aaKnown RBP eCLIP4.01□□□□□ -1.77
CLK1-204ENST00000432425 YY1P25490 414 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 GHRHRQ02643 423 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 CFHR3Q02985 330 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 TRIP6Q15654 476 aaKnown RBP4.01□□□□□ -1.77
CLK1-204ENST00000432425 AWAT1Q58HT5 328 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 PXDC1Q5TGL8 231 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 GLCCI1Q86VQ1 547 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 FCRL4Q96PJ5 515 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 VPS16Q9H269 839 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 USP29Q9HBJ7 922 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 PI4KBQ9UBF8 816 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 VPS51Q9UID3 782 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 ZNF521Q96K83 1311 aa4.01□□□□□ -1.77
CLK1-204ENST00000432425 H3BNC9 293 aa4□□□□□ -1.77
CLK1-204ENST00000432425 ATP5F1P24539 256 aaPredicted RBP4□□□□□ -1.77
CLK1-204ENST00000432425 KRTAP10-11P60412 298 aa4□□□□□ -1.77
CLK1-204ENST00000432425 HTRA4P83105 476 aaPredicted RBP4□□□□□ -1.77
CLK1-204ENST00000432425 MFSD13AQ14CX5 517 aa4□□□□□ -1.77
CLK1-204ENST00000432425 MEX3CQ5U5Q3 659 aaKnown RBP4□□□□□ -1.77
CLK1-204ENST00000432425 P3H2Q8IVL5 708 aa4□□□□□ -1.77
CLK1-204ENST00000432425 C12orf76Q8N812 135 aaPredicted RBP4□□□□□ -1.77
CLK1-204ENST00000432425 PNISRQ8TF01 805 aaKnown RBP4□□□□□ -1.77
CLK1-204ENST00000432425 FAM227BQ96M60 508 aa4□□□□□ -1.77
CLK1-204ENST00000432425 CINPQ9BW66 212 aaPredicted RBP4□□□□□ -1.77
CLK1-204ENST00000432425 SLC25A32Q9H2D1 315 aa4□□□□□ -1.77
CLK1-204ENST00000432425 DDX21Q9NR30 783 aaKnown RBP eCLIP4□□□□□ -1.77
CLK1-204ENST00000432425 TRNAU1APQ9NX07 287 aaKnown RBP4□□□□□ -1.77
CLK1-204ENST00000432425 ASAP1Q9ULH1 1129 aa4□□□□□ -1.77
CLK1-204ENST00000432425 E5RJQ4 531 aa4□□□□□ -1.77
CLK1-204ENST00000432425 PPEF2O14830 753 aa4□□□□□ -1.77
CLK1-204ENST00000432425 MOSPD3O75425 235 aa4□□□□□ -1.77
CLK1-204ENST00000432425 BMP15O95972 392 aa4□□□□□ -1.77
CLK1-204ENST00000432425 TOP3BO95985 862 aaKnown RBP4□□□□□ -1.77
CLK1-204ENST00000432425 COPAP53621 1224 aa4□□□□□ -1.77
CLK1-204ENST00000432425 DEUP1Q05D60 604 aa4□□□□□ -1.77
CLK1-204ENST00000432425 Q4G0T1 1027 aa4□□□□□ -1.77
CLK1-204ENST00000432425 RRAGBQ5VZM2 374 aa4□□□□□ -1.77
CLK1-204ENST00000432425 RANBP10Q6VN20 620 aa4□□□□□ -1.77
CLK1-204ENST00000432425 CCDC33Q8N5R6 958 aa4□□□□□ -1.77
CLK1-204ENST00000432425 FAM71DQ8N9W8 422 aa4□□□□□ -1.77
CLK1-204ENST00000432425 MBD3L2Q8NHZ7 208 aaPredicted RBP4□□□□□ -1.77
CLK1-204ENST00000432425 ZNF398Q8TD17 642 aa4□□□□□ -1.77
CLK1-204ENST00000432425 EDC3Q96F86 508 aaKnown RBP4□□□□□ -1.77
CLK1-204ENST00000432425 HIC2Q96JB3 615 aa4□□□□□ -1.77
CLK1-204ENST00000432425 SELENOOQ9BVL4 669 aa4□□□□□ -1.77
CLK1-204ENST00000432425 SPRTNQ9H040 489 aaPredicted RBP4□□□□□ -1.77
CLK1-204ENST00000432425 GAR1Q9NY12 217 aaKnown RBP4□□□□□ -1.77
CLK1-204ENST00000432425 ELOVL5Q9NYP7 299 aa4□□□□□ -1.77
CLK1-204ENST00000432425 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.99□□□□□ -1.77
CLK1-204ENST00000432425 CLIC1O00299 241 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 FCHO1O14526 889 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 WDR47O94967 919 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 PIK3CBP42338 1070 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 CCDC15Q0P6D6 951 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 RABEP1Q15276 862 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 ANO7Q6IWH7 933 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 KRT28Q7Z3Y7 464 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 LIX1LQ8IVB5 337 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 ATP11CQ8NB49 1132 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 CCDC150Q8NCX0 1101 aa3.99□□□□□ -1.77
CLK1-204ENST00000432425 PIGOQ8TEQ8 1089 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms