RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 RBP3P10745 1247 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 ATF2P15336 505 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 PECAM1P16284 738 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-205ENST00000431183 GOT1P17174 413 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 AP1B1Q10567 949 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 P3H1Q32P28 736 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.53
SMPD4-205ENST00000431183 CASC4Q6P4E1 433 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 PPP1R21Q6ZMI0 780 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 ARFGAP1Q8N6T3 406 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
SMPD4-205ENST00000431183 SNRNP25Q9BV90 132 aaKnown RBP11.77□□□□□ -0.53
SMPD4-205ENST00000431183 MLXIPLQ9NP71 852 aa11.77□□□□□ -0.53
SMPD4-205ENST00000431183 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMPD4-205ENST00000431183 ARID2Q68CP9 1835 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 HSF2BPO75031 334 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 COILP38432 576 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-205ENST00000431183 RAB27AP51159 221 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 EIF3EP60228 445 aaKnown RBP11.76□□□□□ -0.53
SMPD4-205ENST00000431183 RTP2Q5QGT7 225 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 SLFN11Q7Z7L1 901 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-205ENST00000431183 P3H4Q92791 437 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 PRRG1O14668 218 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 KCNN4O15554 427 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 SLC4A1P02730 911 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 GJA1P17302 382 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-205ENST00000431183 LHX1P48742 406 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 NT5DC4Q86YG4 428 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 SLC35F5Q8WV83 523 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 RPGRIP1Q96KN7 1286 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 DUSP16Q9BY84 665 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 ALG13Q9NP73 1137 aaKnown RBP11.76□□□□□ -0.53
SMPD4-205ENST00000431183 ADAM28Q9UKQ2 775 aa11.76□□□□□ -0.53
SMPD4-205ENST00000431183 ENDOD1O94919 500 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 TJP3O95049 919 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 RPL21P46778 160 aaKnown RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 TMC7Q7Z402 723 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 HNRNPLLQ8WVV9 542 aaKnown RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 FMO2Q99518 471 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 CNPY3Q9BT09 278 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 AP4E1Q9UPM8 1137 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 BRWD1Q9NSI6 2320 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 GRXCR1A8MXD5 290 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 E7EVH7 732 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 TRIM71Q2Q1W2 868 aaKnown RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 BBS9Q3SYG4 887 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 C10orf120Q5SQS8 335 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ACTRT1Q8TDG2 376 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 AVENQ9NQS1 362 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ANAPC5Q9UJX4 755 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 NENFQ9UMX5 172 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 DFFAO00273 331 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 EBAG9O00559 213 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 HGSO14964 777 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ZBED1O96006 694 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 EPHB2P29323 1055 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ARL4AP40617 200 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ITKQ08881 620 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 INCA1Q0VD86 236 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 KRT71Q3SY84 523 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ZNF662Q6ZS27 426 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 PAQR9Q6ZVX9 377 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 CCDC110Q8TBZ0 833 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 SLITRK1Q96PX8 696 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 ETNK2Q9NVF9 386 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 XPO7Q9UIA9 1087 aaKnown RBP11.75□□□□□ -0.53
SMPD4-205ENST00000431183 PCDHGC3Q9UN70 934 aa11.75□□□□□ -0.53
SMPD4-205ENST00000431183 POC1B-GALNT4F8VUJ3 575 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 PHF2O75151 1096 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 CLTBP09497 229 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 GBE1Q04446 702 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 GAD2Q05329 585 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 ZNF268Q14587 947 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 FUT10Q6P4F1 479 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 DCLRE1AQ6PJP8 1040 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 UBR7Q8N806 425 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 MYCBPAPQ8TBZ2 947 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 LGMNQ99538 433 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 MPP6Q9NZW5 540 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 MAD1L1Q9Y6D9 718 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 GOLGA4Q13439 2230 aaKnown RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 MCF2LO15068 1137 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 USP12O75317 370 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 F7P08709 466 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 KRT7P08729 469 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 SLC1A1P43005 524 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 SLC5A3P53794 718 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 GDF10P55107 478 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms