RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 KLF8O95600 359 aaPredicted RBP18.04■□□□□ 0.48
CPSF4-203ENST00000430038 KRT13P13646 458 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 EIF2DP41214 584 aaKnown RBP18.04■□□□□ 0.48
CPSF4-203ENST00000430038 KIF11P52732 1056 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 RAD23BP54727 409 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 MRPS21P82921 87 aaKnown RBP18.04■□□□□ 0.48
CPSF4-203ENST00000430038 EDRF1Q3B7T1 1238 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 KRT39Q6A163 491 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 ANKRD40Q6AI12 368 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 HTR3DQ70Z44 454 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 SLC4A11Q8NBS3 891 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 TSTD1Q8NFU3 115 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 SPATA20Q8TB22 786 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 RLN3Q8WXF3 142 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 EXOC4Q96A65 974 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 CYLDQ9NQC7 956 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 ARHGEF4Q9NR80 690 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 SH3BP1Q9Y3L3 701 aa18.04■□□□□ 0.48
CPSF4-203ENST00000430038 TRIM49BA6NDI0 452 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 HOXC11O43248 304 aaPredicted RBP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 ADH1CP00326 375 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 APODP05090 189 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 SDHBP21912 280 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 RPL13P26373 211 aaKnown RBP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 GRIA2P42262 883 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 GAD2Q05329 585 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 ENPEPQ07075 957 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 ZC3H3Q8IXZ2 948 aaKnown RBP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 OLIG1Q8TAK6 271 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 DUSP9Q99956 384 aaKnown RBP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 DUSP16Q9BY84 665 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 FBXO44Q9H4M3 255 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 TLR8Q9NR97 1041 aaKnown RBP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 CISHQ9NSE2 258 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.03■□□□□ 0.48
CPSF4-203ENST00000430038 PCDHA5Q9Y5H7 936 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 ATP6V1DQ9Y5K8 247 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 USP3Q9Y6I4 520 aa18.03■□□□□ 0.48
CPSF4-203ENST00000430038 TULP2O00295 520 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 KLKB1P03952 638 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 RARGP13631 454 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 GTF2H1P32780 548 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 MPLP40238 635 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 TNFRSF4P43489 277 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 ISM2Q6H9L7 571 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 TOGARAM2Q6ZUX3 1019 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 TTC30AQ86WT1 665 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 NDRG1Q92597 394 aaKnown RBP18.02■□□□□ 0.48
CPSF4-203ENST00000430038 OTUB2Q96DC9 234 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.48
CPSF4-203ENST00000430038 HEXIM2Q96MH2 286 aaKnown RBP18.02■□□□□ 0.48
CPSF4-203ENST00000430038 ACOX2Q99424 681 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 RAB20Q9NX57 234 aa18.02■□□□□ 0.48
CPSF4-203ENST00000430038 MBD1Q9UIS9 605 aaPredicted RBP18.02■□□□□ 0.48
CPSF4-203ENST00000430038 ACACBO00763 2458 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 BCLAF3A2AJT9 711 aaKnown RBP18.01■□□□□ 0.47
CPSF4-203ENST00000430038 CD44P16070 742 aaKnown RBP18.01■□□□□ 0.47
CPSF4-203ENST00000430038 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
CPSF4-203ENST00000430038 ANO4Q32M45 955 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 PPM1JQ5JR12 505 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 ZNF658Q5TYW1 1059 aaPredicted RBP18.01■□□□□ 0.47
CPSF4-203ENST00000430038 Q6ZNB5 142 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 TPGS1Q6ZTW0 290 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 FBXL13Q8NEE6 735 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 ERLEC1Q96DZ1 483 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 IMPG2Q9BZV3 1241 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 CD248Q9HCU0 757 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 ADAMTS9Q9P2N4 1935 aa18.01■□□□□ 0.47
CPSF4-203ENST00000430038 ASCC3Q8N3C0 2202 aaKnown RBP18■□□□□ 0.47
CPSF4-203ENST00000430038 CHD8Q9HCK8 2581 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 TBC1D3BA6NDS4 549 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 PATE3B3GLJ2 98 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 PRRT4C9JH25 899 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 CETN3O15182 167 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 STC2O76061 302 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 CISD3P0C7P0 127 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 BMP6P22004 513 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 GBP1P32455 592 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 WASP42768 502 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 MXI1P50539 228 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 CREB5Q02930 508 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 AASDHQ4L235 1098 aaPredicted RBP18■□□□□ 0.47
CPSF4-203ENST00000430038 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 PMS2CLQ68D20 193 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 BHLHA9Q7RTU4 235 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 CCDC186Q7Z3E2 898 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 TMEM176AQ96HP8 235 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 NACA2Q9H009 215 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 PNPLA8Q9NP80 782 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 COQ4Q9Y3A0 265 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 PCDHGA5Q9Y5G8 931 aa18■□□□□ 0.47
CPSF4-203ENST00000430038 NEDD8-MDP1E9PL57 170 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 GABBR2O75899 941 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 P2RY2P41231 377 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 LIMK1P53667 647 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 MAP7D1Q3KQU3 841 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 RAB41Q5JT25 222 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 C10orf120Q5SQS8 335 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 STPG1Q5TH74 334 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms