RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 PARVAQ9NVD7 372 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 ARGLU1Q9NWB6 273 aaPredicted RBP9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 SMPD4Q9NXE4 827 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 MFHAS1Q9Y4C4 1052 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 YIPF1Q9Y548 306 aa9.97□□□□□ -0.81
HMGCLL1-206ENST00000428842 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 MYO1FO00160 1098 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 KCNK3O14649 394 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 ATP8B1O43520 1251 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 LRCH4O75427 683 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 ABLIM3O94929 683 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 HAPLN1P10915 354 aaPredicted RBP9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 KRT10P13645 584 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 ZXDBP98169 803 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 DLX2Q07687 328 aaPredicted RBP9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 GRIN2CQ14957 1233 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 BSPRYQ5W0U4 402 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 C4orf50Q6ZRC1 276 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 DENND5BQ6ZUT9 1274 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 PEX26Q7Z412 305 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 DCP1BQ8IZD4 617 aaKnown RBP9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 IPO4Q8TEX9 1081 aaKnown RBP9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 FAM172AQ8WUF8 416 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 PPM1EQ8WY54 764 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 ING5Q8WYH8 240 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 HSPH1Q92598 858 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 CASP10Q92851 521 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 BHMTQ93088 406 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 HAUS1Q96CS2 278 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 AAASQ9NRG9 546 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 GKN1Q9NS71 199 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 PIGVQ9NUD9 493 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 KIAA1257Q9ULG3 409 aa9.96□□□□□ -0.81
HMGCLL1-206ENST00000428842 C2CD4BA6NLJ0 364 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 MOCS2O96007 188 aaPredicted RBP9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 CALB1P05937 261 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 C8AP07357 584 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 PPM1AP35813 382 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 GABRB2P47870 512 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 HDAC4P56524 1084 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 ELAVL2Q12926 359 aaKnown RBP9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 CCDC85BQ15834 202 aaPredicted RBP9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 RAB41Q5JT25 222 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 LIN9Q5TKA1 542 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 KAZNQ674X7 775 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 TXNDC8Q6A555 127 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 CC2D1AQ6P1N0 951 aaPredicted RBP9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRIM72Q6ZMU5 477 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 ZDHHC14Q8IZN3 488 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 RAPGEF5Q92565 580 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 TIFAQ96CG3 184 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAXDC2Q96IV6 333 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 HERC2P3Q9BVR0 1158 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 RNF38Q9H0F5 515 aa9.96□□□□□ -0.82
HMGCLL1-206ENST00000428842 BDP1A6H8Y1 2624 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 OR6C75A6NL08 312 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 SIGLEC16A6NMB1 481 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC38A8A6NNN8 435 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 TRDMT1O14717 391 aaKnown RBP9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 SETSIPP0DME0 302 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 PYGMP11217 842 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 HMGA1P17096 107 aaKnown RBP9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 CLCN4P51793 760 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 NRLP54845 237 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 YWHAZP63104 245 aaKnown RBP9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 DYNLT1P63172 113 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC5A9Q2M3M2 681 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 TMCO3Q6UWJ1 677 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 CYP4V2Q6ZWL3 525 aaPredicted RBP9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 TMEM150AQ86TG1 271 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 TP53INP2Q8IXH6 220 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 KREMEN2Q8NCW0 462 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 FBXO32Q969P5 355 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 CORO1BQ9BR76 489 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 AP1M1Q9BXS5 423 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 MAN1C1Q9NR34 630 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 DAAM1Q9Y4D1 1078 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 PCDHA11Q9Y5I1 949 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 INSL5Q9Y5Q6 135 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 ANAPC1Q9H1A4 1944 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 A0A1W2PRU2 124 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM72CH0Y354 149 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 H3BNC9 293 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 H7C4K7 107 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 M0QYT0 321 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 CAPN9O14815 690 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 IRF1P10914 325 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 MIPP30301 263 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 SLC8A3P57103 927 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 EFEMP1Q12805 493 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 ADGRE1Q14246 886 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 MEI1Q5TIA1 1274 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM72AQ5TYM5 149 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM72DQ6L9T8 149 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 GAREM2Q75VX8 874 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 DNAJB7Q7Z6W7 309 aaPredicted RBP9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 PRUNE1Q86TP1 453 aa9.95□□□□□ -0.82
HMGCLL1-206ENST00000428842 FAM72BQ86X60 149 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms