RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 IFT122Q9HBG6 1241 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 PLAC1Q9HBJ0 212 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 FOCADQ5VW36 1801 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 PEX1O43933 1283 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 CSH1P0DML2 217 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 CSH2P0DML3 217 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 RBP3P10745 1247 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 NPTX2P47972 431 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 MRPS22P82650 360 aaKnown RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 DPYSL3Q14195 570 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 TDRD10Q5VZ19 366 aaKnown RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 DNAJC24Q6P3W2 148 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 NPNTQ6UXI9 565 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 FBXW8Q8N3Y1 598 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 CCDC33Q8N5R6 958 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 TMC2Q8TDI7 906 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 PNPOQ9NVS9 261 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 KRT37O76014 449 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 TNFAIP8O95379 198 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 TFPTP0C1Z6 253 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 KCNA4P22459 653 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 CCR3P51677 355 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 APOFQ13790 326 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 CYTH1Q15438 398 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 HSP90AA5PQ58FG0 334 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 LRRN4Q8WUT4 740 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 ZNF512Q96ME7 567 aaPredicted RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 ZNF536O15090 1300 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 GREB1LQ9C091 1923 aaPredicted RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 HMX2A2RU54 273 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ITGBL1O95965 494 aaPredicted RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 MMP8P22894 467 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 YWHABP31946 246 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 L1CAMP32004 1257 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 TAF5Q15542 800 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 SLC44A4Q53GD3 710 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 WDR44Q5JSH3 913 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ANGEL2Q5VTE6 544 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 GRIN3AQ8TCU5 1115 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 COPS7BQ9H9Q2 264 aaPredicted RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 THAP1Q9NVV9 213 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 TUBGCP4Q9UGJ1 667 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 GNEQ9Y223 722 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ARHGAP10A1A4S6 786 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 FBXO21O94952 628 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 TNNI1P19237 187 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ATP2B4P23634 1241 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 HDAC4P56524 1084 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 SMAD1Q15797 465 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 FASTKD1Q53R41 847 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 MAP4K3Q8IVH8 894 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 WDR75Q8IWA0 830 aaKnown RBP16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ADGRF2Q8IZF7 708 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ZNF696Q9H7X3 374 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ITGA11Q9UKX5 1188 aa16.99■□□□□ 0.31
RHBDF1-204ENST00000428730 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 DCXO43602 365 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 OATP04181 439 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PDGFRBP09619 1106 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 ARRB2P32121 409 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 GMPRP36959 345 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 EIF3EP60228 445 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 RPL26P61254 145 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 ANKDD1AQ495B1 522 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 ZNF394Q53GI3 561 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 TEDDM1Q5T9Z0 273 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PDPK2PQ6A1A2 396 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 APOBEC3HQ6NTF7 200 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 TRMT10BQ6PF06 316 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 AHI1Q8N157 1196 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PIWIL2Q8TC59 973 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PFDN4Q9NQP4 134 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 MAN1C1Q9NR34 630 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PAIP2BQ9ULR5 123 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PSMD13Q9UNM6 376 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 FAF1Q9UNN5 650 aaPredicted RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 HNRNPDLO14979 420 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 FOXD2O60548 495 aaPredicted RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 VNN1O95497 513 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 CUL2Q13617 745 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 LRRC38Q5VT99 294 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 LILRA2Q8N149 483 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 ARFGAP1Q8N6T3 406 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 IL31RAQ8NI17 732 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 VCPIP1Q96JH7 1222 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 FBXL18Q96ME1 805 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 SLC17A6Q9P2U8 582 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 TJP2Q9UDY2 1190 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 PCSK1NQ9UHG2 260 aa16.98■□□□□ 0.31
RHBDF1-204ENST00000428730 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
RHBDF1-204ENST00000428730 KLHL2O95198 593 aa16.97■□□□□ 0.31
RHBDF1-204ENST00000428730 GSRP00390 522 aa16.97■□□□□ 0.31
RHBDF1-204ENST00000428730 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
RHBDF1-204ENST00000428730 PTPN7P35236 360 aa16.97■□□□□ 0.31
RHBDF1-204ENST00000428730 CD97P48960 835 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms