RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 WWP1Q9H0M0 922 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 A0A087X0B3 334 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 KPNA3O00505 521 aaPredicted RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 KPNA6O60684 536 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SLC16A1P53985 500 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 GEMP55040 296 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 TRMT11Q7Z4G4 463 aaKnown RBP10.05□□□□□ -0.8
SNX13-203ENST00000428135 RGL4Q8IZJ4 473 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CEP70Q8NHQ1 597 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 IL31RAQ8NI17 732 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SEMA4DQ92854 862 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 PNMA5Q96PV4 448 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 ERP44Q9BS26 406 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 EMILIN2Q9BXX0 1053 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 KBTBD4Q9NVX7 518 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 SNX5Q9Y5X3 404 aa10.05□□□□□ -0.8
SNX13-203ENST00000428135 CAND2O75155 1236 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 TGFB3P10600 412 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CD52P31358 61 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 WSCD1Q658N2 575 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CD302Q8IX05 232 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 GALNT4Q8N4A0 578 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 KIF2BQ8N4N8 673 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 GRIN3AQ8TCU5 1115 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 THTPAQ9BU02 230 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 A0A1W2PQJ5 194 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 LRRIQ3A6PVS8 624 aaPredicted RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 FNTAP49354 379 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 INHBEP58166 350 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ACOX1Q15067 660 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 HSP90AA5PQ58FG0 334 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 MARK2Q7KZI7 788 aaKnown RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 C7orf61Q8IZ16 206 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 INPP5DQ92835 1189 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 KLRG1Q96E93 195 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ZIM3Q96PE6 472 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ERGIC2Q96RQ1 377 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ATP13A1Q9HD20 1204 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CYP39A1Q9NYL5 469 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 GTF3C4Q9UKN8 822 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 FAM32AQ9Y421 112 aaKnown RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 PDZK1P1A8MUH7 402 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 KCNK1O00180 336 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 AP3B1O00203 1094 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 SLC26A4O43511 780 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 KATNA1O75449 491 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 SERPINI2O75830 405 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ALOX15P16050 662 aaPredicted RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 YWHAQP27348 245 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CAMK2GQ13555 558 aaPredicted RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 PGS1Q32NB8 556 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ITIH5Q86UX2 942 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 COLGALT1Q8NBJ5 622 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 HES6Q96HZ4 224 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 MYOCQ99972 504 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 BARX2Q9UMQ3 279 aaPredicted RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 TPST1O60507 370 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CCDC22O60826 627 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 NPM3O75607 178 aaKnown RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 RAD23BP54727 409 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 AP2B1P63010 937 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 DNAJC3Q13217 504 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 BMPR2Q13873 1038 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CELF3Q5SZQ8 465 aaKnown RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 ILDR2Q71H61 639 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 VGLL2Q8N8G2 317 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 UBE2Q2Q8WVN8 375 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 ITGA11Q9UKX5 1188 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 STAU1O95793 577 aaKnown RBP10.04□□□□□ -0.8
SNX13-203ENST00000428135 HIC1Q14526 733 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CRY2Q49AN0 593 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CLEC4FQ8N1N0 589 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CSGALNACT1Q8TDX6 532 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 MTBPQ96DY7 904 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 FAM96AQ9H5X1 160 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 SHOC2Q9UQ13 582 aa10.04□□□□□ -0.8
SNX13-203ENST00000428135 CDH16O75309 829 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CCR1P32246 355 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 TNFSF9P41273 254 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 BOP1Q14137 746 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 CSHL1Q14406 222 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 IL17RAQ96F46 866 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 MRPL1Q9BYD6 325 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 CLPBQ9H078 707 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 BUD23O43709 281 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 PLA2G6O60733 806 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 USP12O75317 370 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 IL10P22301 178 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 HPCAP84074 193 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CCDC15Q0P6D6 951 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 IQSEC1Q6DN90 963 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 MOXD1Q6UVY6 613 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 OTOAQ7RTW8 1153 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CYGBQ8WWM9 190 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CASKIN2Q8WXE0 1202 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms