RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 RFPL1O75677 317 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 PARP1P09874 1014 aaKnown RBP4.2□□□□□ -1.74
LINC02541-201ENST00000427157 BRAFP15056 766 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 ME1P48163 572 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
LINC02541-201ENST00000427157 STK3Q13188 491 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 SLC9C1Q4G0N8 1177 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 KIAA1161Q6NSJ0 714 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 APOA5Q6Q788 366 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 ARFGAP1Q8N6T3 406 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 C12orf76Q8N812 135 aaPredicted RBP4.2□□□□□ -1.74
LINC02541-201ENST00000427157 RUNDC1Q96C34 613 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 HIC2Q96JB3 615 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 ZFYVE19Q96K21 471 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 TMEM60Q9H2L4 133 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 AFF4Q9UHB7 1163 aaKnown RBP4.2□□□□□ -1.74
LINC02541-201ENST00000427157 HDAC9Q9UKV0 1011 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 MAFFQ9ULX9 164 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 HS3ST3B1Q9Y662 390 aa4.2□□□□□ -1.74
LINC02541-201ENST00000427157 TTC3P53804 2025 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 A8MVJ9 347 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 FYB1O15117 783 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 CTNND1O60716 968 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 CRYABP02511 175 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 PDGFRBP09619 1106 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 IL1R1P14778 569 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 NTSR1P30989 418 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 RPS16P62249 146 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 GPC5P78333 572 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 ARHGEF7Q14155 803 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 CNN3Q15417 329 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 C3orf38Q5JPI3 329 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 USP49Q70CQ1 688 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 C16orf71Q8IYS4 520 aaPredicted RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 KIAA0319LQ8IZA0 1049 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 C11orf44Q8N8P7 122 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 PNPLA1Q8N8W4 532 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 WIPF2Q8TF74 440 aaPredicted RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 NMD3Q96D46 503 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 DHX36Q9H2U1 1008 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 ZBTB40Q9NUA8 1239 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 DDX56Q9NY93 547 aaKnown RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 ZIM2Q9NZV7 527 aa4.19□□□□□ -1.74
LINC02541-201ENST00000427157 NKX1-2Q9UD57 310 aaPredicted RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.19□□□□□ -1.74
LINC02541-201ENST00000427157 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.18□□□□□ -1.74
LINC02541-201ENST00000427157 CFAP69A5D8W1 941 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 FAM90A8PA6NJQ4 464 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 B4DGG1 531 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 RAB27BO00194 218 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 FRS3O43559 492 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 FAM90A13PP0C7W8 464 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 FAM90A24PP0C7X0 464 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 ACVR2AP27037 513 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 TACR3P29371 465 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 MTX1Q13505 466 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 KPNB1Q14974 876 aaKnown RBP4.18□□□□□ -1.74
LINC02541-201ENST00000427157 COLCA1Q6ZS62 124 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 ACRBPQ8NEB7 543 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 NGDNQ8NEJ9 315 aaKnown RBP4.18□□□□□ -1.74
LINC02541-201ENST00000427157 LYZL4Q96KX0 146 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 TRMOQ9BU70 441 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 FAM234AQ9H0X4 552 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 USP29Q9HBJ7 922 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 FZD4Q9ULV1 537 aa4.18□□□□□ -1.74
LINC02541-201ENST00000427157 ISM1B1AKI9 464 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 PRAMEF2O60811 474 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 TULP3O75386 442 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 TXNP10599 105 aaKnown RBP4.17□□□□□ -1.74
LINC02541-201ENST00000427157 CD19P15391 556 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 ZKSCAN1P17029 563 aaPredicted RBP4.17□□□□□ -1.74
LINC02541-201ENST00000427157 TNFRSF1BP20333 461 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 ADRA1DP25100 572 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 CPT1AP50416 773 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 TXNL4AP83876 142 aaKnown RBP4.17□□□□□ -1.74
LINC02541-201ENST00000427157 HSF1Q00613 529 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 SLC29A2Q14542 456 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 CNGA2Q16280 664 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 ST3GAL2Q16842 350 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 ZNF793Q6ZN11 406 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 UBE2Q1Q7Z7E8 422 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 PIM3Q86V86 326 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 PELI3Q8N2H9 469 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 ZNF668Q96K58 619 aaPredicted RBP4.17□□□□□ -1.74
LINC02541-201ENST00000427157 CAMK1GQ96NX5 476 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 COL20A1Q9P218 1284 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 DKK4Q9UBT3 224 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 STEAP1Q9UHE8 339 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 VPS51Q9UID3 782 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 MID2Q9UJV3 735 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 TPCN1Q9ULQ1 816 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 L1RE1Q9UN81 338 aa4.17□□□□□ -1.74
LINC02541-201ENST00000427157 hCG_2014768A0A024R1R8 64 aa4.16□□□□□ -1.74
LINC02541-201ENST00000427157 ANKRD62A6NC57 917 aa4.16□□□□□ -1.74
LINC02541-201ENST00000427157 AQP7P3A6NL99 342 aa4.16□□□□□ -1.74
LINC02541-201ENST00000427157 PRR23D1E9PI22 279 aaPredicted RBP4.16□□□□□ -1.74
LINC02541-201ENST00000427157 RRHO14718 337 aa4.16□□□□□ -1.74
LINC02541-201ENST00000427157 INPPL1O15357 1258 aa4.16□□□□□ -1.74
LINC02541-201ENST00000427157 SMAD6O43541 496 aaKnown RBP4.16□□□□□ -1.74
LINC02541-201ENST00000427157 CA12O43570 354 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms