RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 SDCBP2Q9H190 292 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 SMYD3Q9H7B4 428 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 MAGEF1Q9HAY2 307 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 DMAP1Q9NPF5 467 aaPredicted RBP9.38□□□□□ -0.91
COPS6-204ENST00000426712 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
COPS6-204ENST00000426712 FBXO10Q9UK96 956 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 SLC6A14Q9UN76 642 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 NEUROG3Q9Y4Z2 214 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 NUMA1Q14980 2115 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 TMEM131Q92545 1883 aa9.38□□□□□ -0.91
COPS6-204ENST00000426712 FREM2Q5SZK8 3169 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 ATP8B3O60423 1300 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 IGHV1OR15-9A0A0B4J2B8 117 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 HHLA1C9JL84 531 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 TRIM24O15164 1050 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 POLR2DO15514 142 aaKnown RBP9.37□□□□□ -0.91
COPS6-204ENST00000426712 CACNG3O60359 315 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 SPINK2P20155 84 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 CASP4P49662 377 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 KDSRQ06136 332 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 ZNF33AQ06730 810 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 NCOA4Q13772 614 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 SGSM1Q2NKQ1 1148 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 ZNF667Q5HYK9 610 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 LYSMD4Q5XG99 296 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 KLHDC10Q6PID8 442 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 ACOT1Q86TX2 421 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 UNC93AQ86WB7 457 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 GABRG3Q99928 467 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 FBXO44Q9H4M3 255 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 SLC32A1Q9H598 525 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 ZDHHC4Q9NPG8 344 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 TLR8Q9NR97 1041 aaKnown RBP9.37□□□□□ -0.91
COPS6-204ENST00000426712 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
COPS6-204ENST00000426712 MARK1Q9P0L2 795 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 GMIPQ9P107 970 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 BCCIPQ9P287 314 aaKnown RBP eCLIP9.37□□□□□ -0.91
COPS6-204ENST00000426712 WDR35Q9P2L0 1181 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 RALYQ9UKM9 306 aaKnown RBP9.37□□□□□ -0.91
COPS6-204ENST00000426712 SCML2Q9UQR0 700 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 SH3BP1Q9Y3L3 701 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 KNTC1P50748 2209 aa9.37□□□□□ -0.91
COPS6-204ENST00000426712 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
COPS6-204ENST00000426712 PKD1L2Q7Z442 2459 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 A0A1W2PQD8 194 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 LRRIQ3A6PVS8 624 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 PRRT4C9JH25 899 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 GFRA2O00451 464 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 IKBKBO14920 756 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 KLRC4O43908 158 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 TLR5O60602 858 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 EXOC3O60645 756 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 PHACTR2O75167 634 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 ZNF217O75362 1048 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 GJB3O75712 270 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 AP1G2O75843 785 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 TBX18O95935 607 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 RPN1P04843 607 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 CD59P13987 128 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 CASP1P29466 404 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 ATP5C1P36542 298 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 RPL6Q02878 288 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 GFPT1Q06210 699 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 IFRD2Q12894 506 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 SLC14A1Q13336 389 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 ANO4Q32M45 955 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 ZACNQ401N2 412 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 EGFLAMQ63HQ2 1017 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 KIAA1211LQ6NV74 962 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 Q6ZNB5 142 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 ARMCX6Q7L4S7 300 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 RABEPKQ7Z6M1 372 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 METTL3Q86U44 580 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 SLC41A1Q8IVJ1 513 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 PGBD3Q8N328 593 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 GOLGA5Q8TBA6 731 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 IPO4Q8TEX9 1081 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 TAF4BQ92750 862 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 ZNF396Q96N95 335 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 ACOX2Q99424 681 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 HNRNPABQ99729 332 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 KCTD10Q9H3F6 313 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 PNPLA8Q9NP80 782 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 OSER1Q9NX31 292 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
COPS6-204ENST00000426712 GOLGA4Q13439 2230 aaKnown RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 ANKRD11Q6UB99 2663 aaPredicted RBP9.36□□□□□ -0.91
COPS6-204ENST00000426712 H0Y626 953 aa9.35□□□□□ -0.91
COPS6-204ENST00000426712 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
COPS6-204ENST00000426712 OPHN1O60890 802 aa9.35□□□□□ -0.91
COPS6-204ENST00000426712 TRIM16O95361 564 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms