RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ADKP55263 362 aaKnown RBP25.66■■□□□ 1.7
VEGFA-209ENST00000425836 KLHDC10Q6PID8 442 aa25.66■■□□□ 1.7
VEGFA-209ENST00000425836 VITQ6UXI7 678 aa25.66■■□□□ 1.7
VEGFA-209ENST00000425836 C18orf8Q96DM3 657 aa25.66■■□□□ 1.7
VEGFA-209ENST00000425836 PIWIL1Q96J94 861 aaKnown RBP25.66■■□□□ 1.7
VEGFA-209ENST00000425836 OBP2AQ9NY56 170 aa25.66■■□□□ 1.7
VEGFA-209ENST00000425836 MFAP3LO75121 409 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 ADCY5O95622 1261 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 LTFP02788 710 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 MBL2P11226 248 aaPredicted RBP25.65■■□□□ 1.7
VEGFA-209ENST00000425836 MMP8P22894 467 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 CENPCQ03188 943 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 C2CD6Q53TS8 623 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 C10orf120Q5SQS8 335 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 OR6B2Q6IFH4 312 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 FAM183BPQ6ZVS7 135 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 RIN3Q8TB24 985 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 EDEM1Q92611 657 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 NACA2Q9H009 215 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 ABCC13Q9NSE7 274 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 SMPD4Q9NXE4 827 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 CPQQ9Y646 472 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 DDX3XO00571 662 aaKnown RBP eCLIP25.65■■□□□ 1.77e-12■■■■□ 20
VEGFA-209ENST00000425836 MDM4O15151 490 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 TDGQ13569 410 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 TAF5Q15542 800 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 TDRD12Q587J7 1177 aaKnown RBP25.65■■□□□ 1.7
VEGFA-209ENST00000425836 WDR59Q6PJI9 974 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 OLFML1Q6UWY5 402 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 TADA2BQ86TJ2 420 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 MFSD6LQ8IWD5 586 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 MSANTD4Q8NCY6 345 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 FAM149B1Q96BN6 582 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 CDK5RAP1Q96SZ6 601 aaKnown RBP25.65■■□□□ 1.7
VEGFA-209ENST00000425836 KIF9Q9HAQ2 790 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 ABHD10Q9NUJ1 306 aa25.65■■□□□ 1.7
VEGFA-209ENST00000425836 ZNF638Q14966 1978 aaKnown RBP25.64■■□□□ 1.7
VEGFA-209ENST00000425836 AKR1B15C9JRZ8 316 aaPredicted RBP25.64■■□□□ 1.69
VEGFA-209ENST00000425836 FYNP06241 537 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 PLEKP08567 350 aaPredicted RBP25.64■■□□□ 1.69
VEGFA-209ENST00000425836 NSFP46459 744 aaKnown RBP25.64■■□□□ 1.69
VEGFA-209ENST00000425836 MMS22LQ6ZRQ5 1243 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 RSRC2Q7L4I2 434 aaKnown RBP25.64■■□□□ 1.69
VEGFA-209ENST00000425836 XYLT1Q86Y38 959 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 ZDHHC17Q8IUH5 632 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 CNGA4Q8IV77 575 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 DRC7Q8IY82 874 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 SH3RF2Q8TEC5 729 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 GOLGA1Q92805 767 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 ZFRQ96KR1 1074 aaKnown RBP25.64■■□□□ 1.69
VEGFA-209ENST00000425836 ARHGAP20Q9P2F6 1191 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 MUTYHQ9UIF7 546 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 DNMT3LQ9UJW3 386 aa25.64■■□□□ 1.69
VEGFA-209ENST00000425836 A0A0C4DFX4 3053 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 SLC6A3Q01959 620 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 GRM2Q14416 872 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 ACAD10Q6JQN1 1059 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 PHF13Q86YI8 300 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-209ENST00000425836 BPIFB1Q8TDL5 484 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 GKN1Q9NS71 199 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 TAS2R14Q9NYV8 317 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 SORCS3Q9UPU3 1222 aa25.63■■□□□ 1.69
VEGFA-209ENST00000425836 OBSL1O75147 1896 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 LEFTY2O00292 366 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 TCF3P15923 654 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 PSMC3P17980 439 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 YWHAZP63104 245 aaKnown RBP25.62■■□□□ 1.69
VEGFA-209ENST00000425836 EFEMP1Q12805 493 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 PTP4A2Q12974 167 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 ZNF77Q15935 545 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 TSR1Q2NL82 804 aaKnown RBP25.62■■□□□ 1.69
VEGFA-209ENST00000425836 EFHC1Q5JVL4 640 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 BEND5Q7L4P6 421 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 RNF139Q8WU17 664 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 DEPDC1BQ8WUY9 529 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 KHSRPQ92945 711 aaKnown RBP eCLIP25.62■■□□□ 1.691e-9■■■□□ 15.1
VEGFA-209ENST00000425836 C11orf70Q9BRQ4 267 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 KLF16Q9BXK1 252 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-209ENST00000425836 COL25A1Q9BXS0 654 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-209ENST00000425836 SMOC2Q9H3U7 446 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 ASNSD1Q9NWL6 643 aa25.62■■□□□ 1.69
VEGFA-209ENST00000425836 GLI1P08151 1106 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 FCHO2Q0JRZ9 810 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 USP4Q13107 963 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 TOGARAM2Q6ZUX3 1019 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 SLC26A9Q7LBE3 791 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 TRMT61BQ9BVS5 477 aaKnown RBP25.61■■□□□ 1.69
VEGFA-209ENST00000425836 OLA1Q9NTK5 396 aaKnown RBP25.61■■□□□ 1.69
VEGFA-209ENST00000425836 ZNHIT6Q9NWK9 470 aaKnown RBP25.61■■□□□ 1.69
VEGFA-209ENST00000425836 ADAM22Q9P0K1 906 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 RASAL2Q9UJF2 1139 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 NAALADL1Q9UQQ1 740 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 NARSO43776 548 aaKnown RBP25.61■■□□□ 1.69
VEGFA-209ENST00000425836 NCAM1P13591 858 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 CDC25BP30305 580 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 MON1BQ7L1V2 547 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 MIB1Q86YT6 1006 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 TC2NQ8N9U0 490 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 TTC16Q8NEE8 873 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 POPDC2Q9HBU9 364 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms