RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PRPF4O43172 522 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■■□□□ 11.6
CUX1-205ENST00000425244 TRUB2O95900 331 aaKnown RBP11.12□□□□□ -0.63
CUX1-205ENST00000425244 ATP5OP48047 213 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 ZNF268Q14587 947 aaPredicted RBP11.12□□□□□ -0.63
CUX1-205ENST00000425244 VSIG1Q86XK7 387 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 NAT8LQ8N9F0 302 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.12□□□□□ -0.63
CUX1-205ENST00000425244 DENND1AQ8TEH3 1009 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 FNIP1Q8TF40 1166 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 ERP27Q96DN0 273 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
CUX1-205ENST00000425244 WDR83Q9BRX9 315 aaKnown RBP11.12□□□□□ -0.63
CUX1-205ENST00000425244 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 ALG13Q9NP73 1137 aaKnown RBP11.12□□□□□ -0.63
CUX1-205ENST00000425244 SENP1Q9P0U3 644 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
CUX1-205ENST00000425244 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
CUX1-205ENST00000425244 A8MUI8 341 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 APOC4-APOC2K7ER74 178 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 NDC80O14777 642 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 NPTXRO95502 500 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 APOC2P02655 101 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 KRT16P08779 473 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 PDGFRAP16234 1089 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 THPOP40225 353 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 MSH2P43246 934 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 NDST1P52848 882 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 ROR1Q01973 937 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 KRT81Q14533 505 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 TMEM132DQ14C87 1099 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 MAP3K21Q5TCX8 1036 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 ZNF410Q86VK4 478 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 RXFP2Q8WXD0 754 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 GRAMD1AQ96CP6 724 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 ASNSD1Q9NWL6 643 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 E5RJQ4 531 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 KPNA6O60684 536 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 P4HA1P13674 534 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 DARSP14868 501 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 EZRP15311 586 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 ADRA1DP25100 572 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 GPD2P43304 727 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 ACLYP53396 1101 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 YWHAGP61981 247 aaKnown RBP eCLIP11.11□□□□□ -0.63
CUX1-205ENST00000425244 ITGA7Q13683 1181 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 SNX17Q15036 470 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 PDK4Q16654 411 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 EFHC2Q5JST6 749 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 ANKLE1Q8NAG6 615 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 MYLK2Q9H1R3 596 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 ETNK1Q9HBU6 452 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 EFR3BQ9Y2G0 817 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 M0QZ92 97 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 PRPSAP2O60256 369 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 GPD1P21695 349 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 SLC8A1P32418 973 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
CUX1-205ENST00000425244 DPYSL3Q14195 570 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 FAXCQ5TGI0 409 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 UNC93B1Q9H1C4 597 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 CXCL16Q9H2A7 254 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 RSAD1Q9HA92 442 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 L3MBTL1Q9Y468 752 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 HEY1Q9Y5J3 304 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 CDY2AQ9Y6F7 541 aa11.11□□□□□ -0.63
CUX1-205ENST00000425244 TYROBPO43914 113 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 AVILO75366 819 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 GNRH1P01148 92 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 MCF2P10911 925 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 VDRP11473 427 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 CYP3A5P20815 502 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 AKAP5P24588 427 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 HOXA11P31270 313 aaPredicted RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 ELK3P41970 407 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 ZNF143P52747 638 aaPredicted RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 POU5F1BQ06416 359 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 KLHL38Q2WGJ6 581 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
CUX1-205ENST00000425244 GLRA4Q5JXX5 417 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 TRNP1Q6NT89 227 aa11.1□□□□□ -0.63
CUX1-205ENST00000425244 IGDCC3Q8IVU1 814 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms