RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 DNAJC16Q9Y2G8 782 aa11.71□□□□□ -0.53
SEC61A1-202ENST00000424880 MAST2Q6P0Q8 1798 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 CENPFP49454 3210 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 E9PBE3 544 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 KLHL41O60662 606 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 PROSCO94903 275 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 PHBP35232 272 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 COPAP53621 1224 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 RPL10AP62906 217 aaKnown RBP11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 BCL2A1Q16548 175 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 DCAF6Q58WW2 860 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 Q6ZNX1 250 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 TEKT1Q969V4 418 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 WRNIP1Q96S55 665 aa11.71□□□□□ -0.54
SEC61A1-202ENST00000424880 CYP3A7-CYP3A51PA0A087WV96 503 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 A8MU76 341 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 CFBP00751 764 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 WEE2P0C1S8 567 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 CACNB3P54284 484 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 MORF4L2Q15014 288 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 MAP3K21Q5TCX8 1036 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 ANO5Q75V66 913 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 BBS5Q8N3I7 341 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 DQX1Q8TE96 717 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 GPAMQ9HCL2 828 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 PIH1D1Q9NWS0 290 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 RAB20Q9NX57 234 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 CNTN3Q9P232 1028 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 TRIM17Q9Y577 477 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 LAMB1P07942 1786 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 SIN3BO75182 1162 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 TGDSO95455 350 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 CD48P09326 243 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 DHRS4L1P0CG22 281 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 PTPN1P18031 435 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 SERPINB5P36952 375 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 CLCN2P51788 898 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 XIAPP98170 497 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 RELAQ04206 551 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 TGFBIQ15582 683 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 LILRA2Q8N149 483 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 ACTL9Q8TC94 416 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNF778Q96MU6 729 aa11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 PPP1R10Q96QC0 940 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 HBS1LQ9Y450 684 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-202ENST00000424880 GOLGA8QA0A0J9YX86 632 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 GOLGA8OA6NCC3 632 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 GOLGA8NF8WBI6 632 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 EIF3DO15371 548 aaKnown RBP eCLIP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 SEC24DO94855 1032 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 P4HA1P13674 534 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 PRAMEP78395 509 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 OTUD4Q01804 1114 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 STX3Q13277 289 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 MAMLD1Q13495 774 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 ABCB5Q2M3G0 1257 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 PDCD4Q53EL6 469 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 HSP90AA5PQ58FG0 334 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 PPM1LQ5SGD2 360 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 FAM91A1Q658Y4 838 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 POTEHQ6S545 545 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 NDUFAF2Q8N183 169 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 LRGUKQ96M69 825 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 SLITRK1Q96PX8 696 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 CAMKK2Q96RR4 588 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 HNRNPABQ99729 332 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 WDR18Q9BV38 432 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 HOMER2Q9NSB8 354 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 TUBA8Q9NY65 449 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 POLLQ9UGP5 575 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 RSL24D1Q9UHA3 163 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 AGTPBP1Q9UPW5 1226 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 CNTNAP2Q9UHC6 1331 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 ARHGAP10A1A4S6 786 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 UNGP13051 313 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 ITGAXP20702 1163 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 RPL22P35268 128 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 XXYLT1Q8NBI6 393 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 TFB1MQ8WVM0 346 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 MCEEQ96PE7 176 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 ZNHIT2Q9UHR6 403 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 CDC14AQ9UNH5 594 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 ARFGEF1Q9Y6D6 1849 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 IQANK1A0A1B0GTG1 560 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 SERPINB7O75635 380 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 AMHP03971 560 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 FAM58BPP0C7Q3 252 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 GAP43P17677 238 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 NDST2P52849 883 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 PEX3P56589 373 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 TRIM72Q6ZMU5 477 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 MYO1HQ8N1T3 1032 aa11.69□□□□□ -0.54
SEC61A1-202ENST00000424880 PQLC1Q8N2U9 271 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms