RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CTNNBL1Q8WYA6 563 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 CDKL2Q92772 493 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TIFAQ96CG3 184 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 GCC1Q96CN9 775 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 RAX2Q96IS3 184 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 FNBP1Q96RU3 617 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 RUFY1Q96T51 708 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ZPBPQ9BS86 351 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 DESI2Q9BSY9 194 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 TEX13BQ9BXU2 312 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 UPF3BQ9BZI7 483 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 ELAC1Q9H777 363 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 CLK4Q9HAZ1 481 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 KIAA1586Q9HCI6 787 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 PLCB1Q9NQ66 1216 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 FKBP14Q9NWM8 211 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 MOCS1Q9NZB8 636 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 DDX25Q9UHL0 483 aaKnown RBP3.1□□□□□ -1.91
PMS1-209ENST00000424059 KIAA1257Q9ULG3 409 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 COG5Q9UP83 839 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ANGPTL3Q9Y5C1 460 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 CD2APQ9Y5K6 639 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 ZNF804BA4D1E1 1349 aa3.1□□□□□ -1.91
PMS1-209ENST00000424059 A8MVJ9 347 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 H0Y626 953 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 NDUFAB1O14561 156 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 STX6O43752 255 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ZEB2O60315 1214 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 FKBP9O95302 570 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 CFIP05156 583 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 IFIT1P09914 478 aaKnown RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 UBL4AP11441 157 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 IDO1P14902 403 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ZFXP17010 805 aaPredicted RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 U2AF2P26368 475 aaKnown RBP eCLIP3.09□□□□□ -1.912e-7■■■■□ 24.4
PMS1-209ENST00000424059 CXCR5P32302 372 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ETV1P50549 477 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 MRPL12P52815 198 aaKnown RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 SLC12A2P55011 1212 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 PLTPP55058 493 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 IL2P60568 153 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 DR1Q01658 176 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ACY1Q03154 408 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 G3BP1Q13283 466 aaKnown RBP eCLIP3.09□□□□□ -1.91
PMS1-209ENST00000424059 ELF2Q15723 593 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 GPR162Q16538 588 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 CCNG2Q16589 344 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 TUBB8Q3ZCM7 444 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ANKDD1AQ495B1 522 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 SPDYE7PQ495Y7 208 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 FAM47AQ5JRC9 791 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 MEX3CQ5U5Q3 659 aaKnown RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 METRNLQ641Q3 311 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 LIN54Q6MZP7 749 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 FBXO42Q6P3S6 717 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 FAM173BQ6P4H8 233 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 CNNM4Q6P4Q7 775 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 TLDC1Q6P9B6 456 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 FKBP9P1Q75LS8 142 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ARHGAP22Q7Z5H3 698 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 MFN1Q8IWA4 741 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 RHOT2Q8IXI1 618 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 CCDC13Q8IYE1 715 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 COLGALT2Q8IYK4 626 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 IQUBQ8NA54 791 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 OR6C4Q8NGE1 309 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 NUP133Q8WUM0 1156 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 SLC5A5Q92911 643 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 MFSD3Q96ES6 412 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 CNDP2Q96KP4 475 aaKnown RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 ACAP3Q96P50 834 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 MTMR9Q96QG7 549 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ADAM2Q99965 735 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 PI4K2AQ9BTU6 479 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 ASPSCR1Q9BZE9 553 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 CDH19Q9H159 772 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 TRPV6Q9H1D0 765 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 WNT5BQ9H1J7 359 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 NCOR1P1Q9H4R4 102 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 BRD9Q9H8M2 597 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 SPTLC3Q9NUV7 552 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 DDX18Q9NVP1 670 aaKnown RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 PPP1R14DQ9NXH3 145 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 AATFQ9NY61 560 aaKnown RBP eCLIP3.09□□□□□ -1.91
PMS1-209ENST00000424059 ZNF624Q9P2J8 865 aaPredicted RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 NFKBIL1Q9UBC1 381 aaPredicted RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 MCM8Q9UJA3 840 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 NOB1Q9ULX3 412 aaKnown RBP3.09□□□□□ -1.91
PMS1-209ENST00000424059 EDARQ9UNE0 448 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 AGTPBP1Q9UPW5 1226 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 RPTORQ8N122 1335 aa3.09□□□□□ -1.91
PMS1-209ENST00000424059 TRAV6A0A075B6T7 132 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 GPR75-ASB3A0A0A6YYF3 556 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 CLRN2A0PK11 232 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 ANO9A1A5B4 782 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 NDC80O14777 642 aa3.09□□□□□ -1.92
PMS1-209ENST00000424059 LSM1O15116 133 aaKnown RBP3.09□□□□□ -1.92
PMS1-209ENST00000424059 NVLO15381 856 aaKnown RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms