RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DNAI2Q9GZS0 605 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 IL37Q9NZH6 218 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 A0A1B0GVL5 298 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 BEST1O76090 585 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 ASS1P00966 412 aaKnown RBP17.06■□□□□ 0.32
COL18A1-205ENST00000423214 HLA-DRAP01903 254 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 ZDHHC11BP0C7U3 371 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 ASPAP45381 313 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 SV2AQ7L0J3 742 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 PHTF2Q8N3S3 785 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 TMEM174Q8WUU8 243 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 DUSP9Q99956 384 aaKnown RBP17.06■□□□□ 0.32
COL18A1-205ENST00000423214 NUSAP1Q9BXS6 441 aaKnown RBP17.06■□□□□ 0.32
COL18A1-205ENST00000423214 CSNK1G1Q9HCP0 422 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.325e-12■■■■■ 96.1
COL18A1-205ENST00000423214 DNAJC17Q9NVM6 304 aaKnown RBP17.06■□□□□ 0.32
COL18A1-205ENST00000423214 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 ZDHHC9Q9Y397 364 aa17.06■□□□□ 0.32
COL18A1-205ENST00000423214 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 PATE3B3GLJ2 98 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 NEDD8-MDP1E9PL57 170 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 IKBKBO14920 756 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 ADAM23O75077 832 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 CHRM1P11229 460 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-205ENST00000423214 HOXB2P14652 356 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 ATP5C1P36542 298 aaKnown RBP17.05■□□□□ 0.32
COL18A1-205ENST00000423214 DPP6P42658 865 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 VAMP7P51809 220 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 SHC2P98077 582 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 ZNF252P-AS1Q0IIN9 211 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 TRIM61Q5EBN2 209 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 LYSMD4Q5XG99 296 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 TMEFF1Q8IYR6 380 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 CRYBG2Q8N1P7 616 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 C12orf29Q8N999 325 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 CCDC150Q8NCX0 1101 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 SPATA32Q96LK8 384 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 XPO6Q96QU8 1125 aaKnown RBP17.05■□□□□ 0.32
COL18A1-205ENST00000423214 BBS2Q9BXC9 721 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 EVLQ9UI08 416 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-205ENST00000423214 PCDHA5Q9Y5H7 936 aa17.05■□□□□ 0.32
COL18A1-205ENST00000423214 ATXN2Q99700 1313 aaKnown RBP17.04■□□□□ 0.32
COL18A1-205ENST00000423214 ZBTB24O43167 697 aaPredicted RBP17.04■□□□□ 0.32
COL18A1-205ENST00000423214 CYP26A1O43174 497 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 KRT13P13646 458 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 ACO1P21399 889 aaKnown RBP17.04■□□□□ 0.32
COL18A1-205ENST00000423214 NR2F2P24468 414 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 INCA1Q0VD86 236 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 LMAN2Q12907 356 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 UAP1L1Q3KQV9 507 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 SH3PXD2AQ5TCZ1 1133 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 CLEC20AQ6ZU45 233 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 INTS8Q75QN2 995 aaKnown RBP17.04■□□□□ 0.32
COL18A1-205ENST00000423214 GPRIN1Q7Z2K8 1008 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 TMEM25Q86YD3 366 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 WBP2Q969T9 261 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 NT5C1AQ9BXI3 368 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 NIF3L1Q9GZT8 377 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 MMRN2Q9H8L6 949 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 SCML2Q9UQR0 700 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
COL18A1-205ENST00000423214 CKAP5Q14008 2032 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 MAPK13O15264 365 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 AP5Z1O43299 807 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 CACNG3O60359 315 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 TRIM49P0CI25 452 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 TRIM49CP0CI26 452 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 CD58P19256 250 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 CMA1P23946 247 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 NTSR1P30989 418 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 WASP42768 502 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 SYKP43405 635 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 KRT85P78386 507 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 IRX4P78413 519 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 SDE2Q6IQ49 451 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 TPGS1Q6ZTW0 290 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 HTR3DQ70Z44 454 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 SYT12Q8IV01 421 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 FAM186BQ8IYM0 893 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 CYFIP2Q96F07 1278 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 KLF16Q9BXK1 252 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-205ENST00000423214 PNPLA8Q9NP80 782 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 CYLDQ9NQC7 956 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 WDR35Q9P2L0 1181 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 MBD1Q9UIS9 605 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-205ENST00000423214 TRAF3IP3Q9Y228 551 aa17.03■□□□□ 0.32
COL18A1-205ENST00000423214 CACNA1EQ15878 2313 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 GIPC1O14908 333 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 TBX18O95935 607 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 TYRP14679 529 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 PTGER3P43115 390 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 GCLMP48507 274 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 PGFP49763 221 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 RPL6Q02878 288 aaKnown RBP17.02■□□□□ 0.32
COL18A1-205ENST00000423214 MAP7D1Q3KQU3 841 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.32
COL18A1-205ENST00000423214 C10orf120Q5SQS8 335 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms