RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 UBAP1Q9NZ09 502 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 PACSIN3Q9UKS6 424 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 INPP5FQ9Y2H2 1132 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 LOC100653049A0A140TA62 436 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 TESPA1A2RU30 521 aaPredicted RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 APOC4-APOC2K7ER74 178 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 SIN3BO75182 1162 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 KRT34O76011 436 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 APOC2P02655 101 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 TFAP2AP05549 437 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 TBXAS1P24557 533 aaPredicted RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 TBL3Q12788 808 aaKnown RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 TRMT10BQ6PF06 316 aaKnown RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 MAVSQ7Z434 540 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 ADGRF2Q8IZF7 708 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 DGCR14Q96DF8 476 aaKnown RBP17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 USP29Q9HBJ7 922 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 EFR3BQ9Y2G0 817 aa17.29■□□□□ 0.36
NPC1L1-203ENST00000423141 SF3B1O75533 1304 aaKnown RBP eCLIP17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 CCDC160A6NGH7 325 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 GK3PQ14409 553 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 TAZQ16635 292 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 PAOXQ6QHF9 649 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 DEFB107AQ8IZN7 70 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 UBR7Q8N806 425 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 SYTL5Q8TDW5 730 aaPredicted RBP17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 POLR3FQ9H1D9 316 aaPredicted RBP17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 CYTH4Q9UIA0 394 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 TCP10L2B9ZVM9 353 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 MAP3K6O95382 1288 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 GSRP00390 522 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 KRT7P08729 469 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 KRT3P12035 628 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 RGS2P41220 211 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 JAK3P52333 1124 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 RPL10AP62906 217 aaKnown RBP17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 ROR1Q01973 937 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 VWA5B1Q5TIE3 1220 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 KLHDC10Q6PID8 442 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 ICA1LQ8NDH6 482 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 PPP1R14CQ8TAE6 165 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 PNPLA8Q9NP80 782 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 THAP1Q9NVV9 213 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 PTTG2Q9NZH5 202 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 MAD1L1Q9Y6D9 718 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 RPS6KL1Q9Y6S9 549 aa17.28■□□□□ 0.36
NPC1L1-203ENST00000423141 EDN1P05305 212 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 ICAM1P05362 532 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 ENPEPQ07075 957 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 PGM5Q15124 567 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 NADK2Q4G0N4 442 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 FASTKD1Q53R41 847 aaKnown RBP17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 PPP1R2P3Q6NXS1 205 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 DENND1BQ6P3S1 775 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 SCARA5Q6ZMJ2 495 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 CAND1Q86VP6 1230 aaKnown RBP17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 CDAN1Q8IWY9 1227 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 THNSL1Q8IYQ7 743 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 GRIP2Q9C0E4 1043 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 ZNF180Q9UJW8 692 aa17.27■□□□□ 0.36
NPC1L1-203ENST00000423141 ZSCAN9O15535 394 aaPredicted RBP17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 SPAG6O75602 509 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 TMCC1O94876 653 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 STBD1O95210 358 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 LSM8O95777 96 aaKnown RBP17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 ATP6V1B1P15313 513 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 KCNA4P22459 653 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 PMLP29590 882 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 L1CAMP32004 1257 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 SNAPC2Q13487 334 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 RAB6CQ53S08 254 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 PIWIL2Q8TC59 973 aaKnown RBP17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 ACTRT2Q8TDY3 377 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 FRMD8P1Q9BZ68 369 aaPredicted RBP17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 RAB6CQ9H0N0 254 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 DEFB129Q9H1M3 183 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 EPB41L1Q9H4G0 881 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 SYNPO2Q9UMS6 1093 aa17.27■□□□□ 0.35
NPC1L1-203ENST00000423141 AHDC1Q5TGY3 1603 aaPredicted RBP17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 PFDN1O60925 122 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 CD1EP15812 388 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 ITGAXP20702 1163 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 PRKCHP24723 683 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 FDFT1P37268 417 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 HPCAP84074 193 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 BTKQ06187 659 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 CDK18Q07002 472 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 TEDDM1Q5T9Z0 273 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 C1orf228Q6PIY5 440 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 FRMD7Q6ZUT3 714 aa17.26■□□□□ 0.35
NPC1L1-203ENST00000423141 PODNQ7Z5L7 613 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms