RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 SF3B1O75533 1304 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTCFL-204ENST00000422869 CNTNAP2Q9UHC6 1331 aa13.18□□□□□ -0.3
CTCFL-204ENST00000422869 H3BNX3 289 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CHADO15335 359 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 STAM2O75886 525 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 GSRP00390 522 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CSH1P0DML2 217 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CSH2P0DML3 217 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CDH5P33151 784 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CBLBQ13191 982 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 STX3Q13277 289 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TRIP10Q15642 601 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 MAP3K21Q5TCX8 1036 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ACTRT2Q8TDY3 377 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CGRRF1Q99675 332 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 APOL6Q9BWW8 343 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 THAP1Q9NVV9 213 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 BIRC5O15392 142 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 HNRNPRO43390 633 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 PROCP04070 461 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 RAG1P15918 1043 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CRHR1P34998 444 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 RGS2P41220 211 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 COPAP53621 1224 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 RPL26P61254 145 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 GHRHRQ02643 423 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 FOLH1Q04609 750 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TBL3Q12788 808 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ADGRF2Q8IZF7 708 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 JADE3Q92613 823 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 DGCR14Q96DF8 476 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 DNAJC1Q96KC8 554 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 MMP19Q99542 508 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ZNF518BQ9C0D4 1074 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 GABBR1Q9UBS5 961 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 POMPQ9Y244 141 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TELO2Q9Y4R8 837 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ITM2AO43736 263 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 SIN3BO75182 1162 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 LYPLA1O75608 230 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CST3P01034 146 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TFAP2AP05549 437 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 CAP2P40123 477 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 FKBP1AP62942 108 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ROR1Q01973 937 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TLR1Q15399 786 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 PTPN20Q4JDL3 420 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ARCQ7LC44 396 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 MAVSQ7Z434 540 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 FAF2Q96CS3 445 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 BTBD9Q96Q07 612 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 POLR3FQ9H1D9 316 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
CTCFL-204ENST00000422869 PCSK1NQ9UHG2 260 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 KIAA1217Q5T5P2 1943 aa13.17□□□□□ -0.3
CTCFL-204ENST00000422869 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 TXNDC9O14530 226 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 KRT3P12035 628 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 EIF4BP23588 611 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 SCNN1BP51168 640 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 ITGA9Q13797 1035 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 CAND1Q86VP6 1230 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 HPS6Q86YV9 775 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 EMC1Q8N766 993 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 PIWIL2Q8TC59 973 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 APBB2Q92870 758 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 TRIM56Q9BRZ2 755 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 HOMER2Q9NSB8 354 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 CYTH4Q9UIA0 394 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 PCDHA10Q9Y5I2 948 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 PEX1O43933 1283 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 DGAT1O75907 488 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 ASS1P00966 412 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 SNAPC2Q13487 334 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 TCHHL1Q5QJ38 904 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 MBLAC2Q68D91 279 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 DARS2Q6PI48 645 aaKnown RBP13.16□□□□□ -0.3
CTCFL-204ENST00000422869 TRIM74Q86UV6 250 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms