RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PGFP49763 221 aa23.05■■□□□ 1.28
TRAF4-204ENST00000422344 GALK1P51570 392 aa23.05■■□□□ 1.28
TRAF4-204ENST00000422344 GCNT1Q02742 428 aa23.05■■□□□ 1.28
TRAF4-204ENST00000422344 SPEM2Q0P670 501 aa23.05■■□□□ 1.28
TRAF4-204ENST00000422344 ARHGAP18Q8N392 663 aa23.05■■□□□ 1.28
TRAF4-204ENST00000422344 ZFRQ96KR1 1074 aaKnown RBP23.05■■□□□ 1.28
TRAF4-204ENST00000422344 ADH1CP00326 375 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 CYP17A1P05093 508 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 MTIF2P46199 727 aaKnown RBP23.04■■□□□ 1.28
TRAF4-204ENST00000422344 SATB1Q01826 763 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 BST2Q10589 180 aaKnown RBP23.04■■□□□ 1.28
TRAF4-204ENST00000422344 GAS6Q14393 721 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 DPCR1Q3MIW9 517 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 C10orf120Q5SQS8 335 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 PRR23BQ6ZRT6 265 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 TTC30AQ86WT1 665 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 ARHGEF19Q8IW93 802 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 FAM114A1Q8IWE2 563 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 KAT5Q92993 513 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 OTUB2Q96DC9 234 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 IPO9Q96P70 1041 aaKnown RBP23.04■■□□□ 1.28
TRAF4-204ENST00000422344 CDK5RAP1Q96SZ6 601 aaKnown RBP23.04■■□□□ 1.28
TRAF4-204ENST00000422344 RTKNQ9BST9 563 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 NMUR1Q9HB89 426 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 LRRC4Q9HBW1 653 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 OSER1Q9NX31 292 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 USP3Q9Y6I4 520 aa23.04■■□□□ 1.28
TRAF4-204ENST00000422344 XPO1O14980 1071 aaKnown RBP23.03■■□□□ 1.28
TRAF4-204ENST00000422344 ATG13O75143 517 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 TBX18O95935 607 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 EGFP01133 1207 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 PDE4CQ08493 712 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 DHCR24Q15392 516 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 FBXO43Q4G163 708 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 LAIR1Q6GTX8 287 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 ADGRG2Q8IZP9 1017 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 RBBP8NLQ8NC74 664 aaPredicted RBP23.03■■□□□ 1.28
TRAF4-204ENST00000422344 MED15Q96RN5 788 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.03■■□□□ 1.28
TRAF4-204ENST00000422344 DNMT3LQ9UJW3 386 aa23.03■■□□□ 1.28
TRAF4-204ENST00000422344 LSM7Q9UK45 103 aaKnown RBP23.03■■□□□ 1.28
TRAF4-204ENST00000422344 O00370 1275 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 SETSIPP0DME0 302 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 ERCC5P28715 1186 aaPredicted RBP23.02■■□□□ 1.28
TRAF4-204ENST00000422344 TKTL1P51854 596 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 STILQ15468 1287 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 RAB41Q5JT25 222 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 NAIF1Q69YI7 327 aaPredicted RBP23.02■■□□□ 1.28
TRAF4-204ENST00000422344 KLHDC10Q6PID8 442 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 SCD5Q86SK9 330 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 UBA3Q8TBC4 463 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 THAP9Q9H5L6 903 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 FBRSL1Q9HCM7 1045 aaKnown RBP23.02■■□□□ 1.28
TRAF4-204ENST00000422344 CLIC5Q9NZA1 410 aa23.02■■□□□ 1.28
TRAF4-204ENST00000422344 RNF40O75150 1001 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 ADH5P11766 374 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 KRT5P13647 590 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 LCLAT1Q6UWP7 414 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 GBP6Q6ZN66 633 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 RSRC2Q7L4I2 434 aaKnown RBP23.01■■□□□ 1.27
TRAF4-204ENST00000422344 BBS7Q8IWZ6 715 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 SIX6OS1Q8N1H7 587 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 CCDC26Q8TAB7 109 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 FAM81BQ96LP2 452 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 CRACR2AQ9BSW2 395 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 KLF16Q9BXK1 252 aaPredicted RBP23.01■■□□□ 1.27
TRAF4-204ENST00000422344 UBE2TQ9NPD8 197 aaPredicted RBP23.01■■□□□ 1.27
TRAF4-204ENST00000422344 NUDT5Q9UKK9 219 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.01■■□□□ 1.27
TRAF4-204ENST00000422344 RALGAPA1Q6GYQ0 2036 aa23.01■■□□□ 1.27
TRAF4-204ENST00000422344 TULP2O00295 520 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 MDM4O15151 490 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 ZBED1O96006 694 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 BRD2P25440 801 aaKnown RBP23■■□□□ 1.27
TRAF4-204ENST00000422344 PLA2G4AP47712 749 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 YWHAGP61981 247 aaKnown RBP eCLIP23■■□□□ 1.27
TRAF4-204ENST00000422344 DMWDQ09019 674 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 SIM2Q14190 667 aaPredicted RBP23■■□□□ 1.27
TRAF4-204ENST00000422344 BTBD8Q5XKL5 378 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 RHBDF2Q6PJF5 856 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 ENOSF1Q7L5Y1 443 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 MIB1Q86YT6 1006 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 TFAP2BQ92481 460 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 ULBP1Q9BZM6 244 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 RASAL2Q9UJF2 1139 aa23■■□□□ 1.27
TRAF4-204ENST00000422344 KMT2BQ9UMN6 2715 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-204ENST00000422344 CHURC1-FNTBB4DL54 471 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 M0QYV0 167 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 RNF225M0QZC1 329 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-204ENST00000422344 PAPSS2O95340 614 aaPredicted RBP22.99■■□□□ 1.27
TRAF4-204ENST00000422344 RETP07949 1114 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 OPRD1P41143 372 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 FNTBP49356 437 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 MFAP3P55082 362 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 GAD2Q05329 585 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 ADIGQ0VDE8 80 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 CNGA2Q16280 664 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 LY6G5CQ5SRR4 150 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 TRIM65Q6PJ69 517 aa22.99■■□□□ 1.27
TRAF4-204ENST00000422344 HTR3DQ70Z44 454 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms