RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 GOLGA1Q92805 767 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 SEMA4DQ92854 862 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 CHFRQ96EP1 664 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 TWNKQ96RR1 684 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 TRIM62Q9BVG3 475 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 LRRC4Q9HBW1 653 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 POLMQ9NP87 494 aaPredicted RBP9.1□□□□□ -0.95
MDC1-204ENST00000422266 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.1□□□□□ -0.95
MDC1-204ENST00000422266 KIAA1468Q9P260 1216 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 DEC1Q9P2X7 70 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
MDC1-204ENST00000422266 EP300Q09472 2414 aaPredicted RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 TRIM49BA6NDI0 452 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 TBC1D3BA6NDS4 549 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 AXIN1O15169 862 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 SART1O43290 800 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 RPP40O75818 363 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 RHOBTB1O94844 696 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 KAT7O95251 611 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ZBED1O96006 694 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 AFPP02771 609 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 CYBBP04839 570 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 RARGP13631 454 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 OPRD1P41143 372 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 FNTBP49356 437 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ZXDBP98169 803 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 DMC1Q14565 340 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ELF2Q15723 593 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 TPD52L1Q16890 204 aaPredicted RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 ANO4Q32M45 955 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 USP39Q53GS9 565 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 RAB41Q5JT25 222 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 LY6G5CQ5SRR4 150 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 SDE2Q6IQ49 451 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 RSRC2Q7L4I2 434 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 PIGZQ86VD9 579 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 FAM114A1Q8IWE2 563 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 SIX6OS1Q8N1H7 587 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 SCML4Q8N228 414 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 PPM1KQ8N3J5 372 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 TSTD1Q8NFU3 115 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 RNF139Q8WU17 664 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ERCC4Q92889 916 aaPredicted RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 TATDN2Q93075 761 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 KLF16Q9BXK1 252 aaPredicted RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 CNGB3Q9NQW8 809 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 ARHGEF4Q9NR80 690 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 RWDD2AQ9UIY3 292 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 TSPAN16Q9UKR8 245 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 MMP17Q9ULZ9 603 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 CTNND2Q9UQB3 1225 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 PCDHGA5Q9Y5G8 931 aa9.09□□□□□ -0.95
MDC1-204ENST00000422266 HELZP42694 1942 aaKnown RBP9.09□□□□□ -0.95
MDC1-204ENST00000422266 COL4A3Q01955 1670 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 A0A1W2PQH9 124 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 NPC1O15118 1278 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 CYP26A1O43174 497 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 MED7O43513 233 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 CD19P15391 556 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 DPP6P42658 865 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 HARS2P49590 506 aaKnown RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 TKTL1P51854 596 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 ZNF132P52740 706 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 KCNH2Q12809 1159 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 CNGA2Q16280 664 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 MEA1Q16626 185 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 GOLGA7BQ2TAP0 167 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 CT47A1Q5JQC4 288 aaPredicted RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 HEATR6Q6AI08 1181 aaKnown RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 PM20D1Q6GTS8 502 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 TMEM270Q6UE05 265 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 LCLAT1Q6UWP7 414 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 TRIM59Q8IWR1 403 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 KIAA2013Q8IYS2 634 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 ZNF557Q8N988 423 aaPredicted RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 EHBP1Q8NDI1 1231 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 USP33Q8TEY7 942 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 KCTD13Q8WZ19 329 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 IRGQQ8WZA9 623 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 ELMO3Q96BJ8 720 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 PLD4Q96BZ4 506 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 HSFY1Q96LI6 401 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 BBS2Q9BXC9 721 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 SRRTQ9BXP5 876 aaKnown RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 FBRSL1Q9HCM7 1045 aaKnown RBP9.08□□□□□ -0.96
MDC1-204ENST00000422266 ABCC13Q9NSE7 274 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 MARK1Q9P0L2 795 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 USP18Q9UMW8 372 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 VPS13AQ96RL7 3174 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 OTOGLQ3ZCN5 2332 aa9.08□□□□□ -0.96
MDC1-204ENST00000422266 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
MDC1-204ENST00000422266 GOLGA6L22H0YM25 854 aa9.07□□□□□ -0.96
MDC1-204ENST00000422266 K7EQS6 105 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms