RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 KIR2DL1P43626 348 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 MXI1P50539 228 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 MCCD1P59942 119 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 CREB5Q02930 508 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 MESP2Q0VG99 397 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 HTR3DQ70Z44 454 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 TXNDC5Q8NBS9 432 aaKnown RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 WHAMMQ8TF30 809 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 CYFIP2Q96F07 1278 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 MMRN2Q9H8L6 949 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 POLMQ9NP87 494 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■■■■■ 31.1
SQSTM1-203ENST00000422245 RMND1Q9NWS8 449 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 DEC1Q9P2X7 70 aa12.19□□□□□ -0.46
SQSTM1-203ENST00000422245 NUP205Q92621 2012 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 EPG5Q9HCE0 2579 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 PLXND1Q9Y4D7 1925 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 TBC1D3BA6NDS4 549 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 SGK1O00141 431 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 SLC16A3O15427 465 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 GREM1O60565 184 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 CAVIN2O95810 425 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 ACO1P21399 889 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 TIE1P35590 1138 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 PGFP49763 221 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 PSEN1P49768 467 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 ANO4Q32M45 955 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 C10orf76Q5T2E6 689 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 STPG1Q5TH74 334 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 TMEM92Q6UXU6 159 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 CCDC186Q7Z3E2 898 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 CYP2U1Q7Z449 544 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 TTC30AQ86WT1 665 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 SFTPA1Q8IWL2 248 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 TERB1Q8NA31 727 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 FBXL13Q8NEE6 735 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 OLIG1Q8TAK6 271 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 CDK5RAP1Q96SZ6 601 aaKnown RBP12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 KLF16Q9BXK1 252 aaPredicted RBP12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 MARK1Q9P0L2 795 aa12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 BCCIPQ9P287 314 aaKnown RBP eCLIP12.18□□□□□ -0.46
SQSTM1-203ENST00000422245 A0A1W2PQH9 124 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 TCRBV21S2A2A0A5A6 115 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 ANTXRLA6NF34 631 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 CETN3O15182 167 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 CACNG3O60359 315 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 ADAM23O75077 832 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 TBX18O95935 607 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 HNRNPLP14866 589 aaKnown RBP eCLIP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 KIF11P52732 1056 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 BYSLQ13895 437 aaKnown RBP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 COBLL1Q53SF7 1204 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 C10orf120Q5SQS8 335 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 RNF43Q68DV7 783 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 GRAMD4Q6IC98 578 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 TCEAL6Q6IPX3 200 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 TMEM25Q86YD3 366 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 ZNF513Q8N8E2 541 aaPredicted RBP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 TCEAL3Q969E4 200 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 WBP2Q969T9 261 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 TSG101Q99816 390 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 DUSP16Q9BY84 665 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 SMOC1Q9H4F8 434 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 GDPD2Q9HCC8 539 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 RXFP3Q9NSD7 469 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 OSER1Q9NX31 292 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 CLIC5Q9NZA1 410 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 DNMT3LQ9UJW3 386 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 NAGPAQ9UK23 515 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 THADAQ6YHU6 1953 aa12.17□□□□□ -0.46
SQSTM1-203ENST00000422245 ABCA7Q8IZY2 2146 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 MYO18AQ92614 2054 aaKnown RBP12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 NEDD8-MDP1E9PL57 170 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 RALAP11233 206 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 RARGP13631 454 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 BCKDHBP21953 392 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 KCNA4P22459 653 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 P2RY2P41231 377 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 PLA2G4AP47712 749 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 SLC8A3P57103 927 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 PNOCQ13519 176 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 PPP1R26Q5T8A7 1209 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 EMC10Q5UCC4 262 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 Q6ZNB5 142 aa12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 FMR1NBQ8N0W7 255 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1-203ENST00000422245 ARHGAP18Q8N392 663 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms