RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 RAP1GAPP47736 663 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 CLCN2P51788 898 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 SF3A3Q12874 501 aaKnown RBP eCLIP15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 ZNF211Q13398 564 aaPredicted RBP15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 PTPROQ16827 1216 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 PABPC1LQ4VXU2 614 aaKnown RBP15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 ACAD10Q6JQN1 1059 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 CCDC25Q86WR0 208 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 PASD1Q8IV76 773 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 DENND1AQ8TEH3 1009 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 DDX1Q92499 740 aaKnown RBP15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 CD101Q93033 1021 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 STMN2Q93045 179 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 ZNF653Q96CK0 615 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 ARHGEF26Q96DR7 871 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 PCMTD2Q9NV79 361 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 ZFP69BQ9UJL9 534 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 ST3GAL5Q9UNP4 418 aa15.41■□□□□ 0.06
SEMA4D-204ENST00000420101 MOXD2PA6NHM9 499 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 FSCN2O14926 492 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 PSMG1O95456 288 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 ACSL3O95573 720 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 TROVE2P10155 538 aaKnown RBP eCLIP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 FOXN2P32314 431 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 ASPAP45381 313 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 NSFP46459 744 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 RPL26P61254 145 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CLEC16AQ2KHT3 1053 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 FAM91A1Q658Y4 838 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 ZNF365Q70YC5 407 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 UHMK1Q8TAS1 419 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 PIP4K2CQ8TBX8 421 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CPA5Q8WXQ8 436 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CFAP57Q96MR6 1250 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 SUDS3Q9H7L9 328 aaPredicted RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CYLDQ9NQC7 956 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 TRMT13Q9NUP7 481 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 SSX2IPQ9Y2D8 614 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 DERAQ9Y315 318 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 IPPQ9Y573 584 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 RASA4BC9J798 803 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 GPR182O15218 404 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 ATMINO43313 823 aaPredicted RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 RASA4O43374 803 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 XPOTO43592 962 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 DNAJC6O75061 913 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CHRNA1P02708 482 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CD19P15391 556 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 CDH8P55286 799 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 KRT72Q14CN4 511 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 SIX1Q15475 284 aaPredicted RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 UBXN11Q5T124 520 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 ARRDC4Q8NCT1 418 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 MAML1Q92585 1016 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 NDNQ99608 321 aa15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 SENP6Q9GZR1 1112 aaPredicted RBP15.4■□□□□ 0.06
SEMA4D-204ENST00000420101 TMEM110-MUSTN1A8MSY1 372 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 KBTBD13C9JR72 458 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 CREB1P16220 341 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 RANBP1P43487 201 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 WDR4P57081 412 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 CENPCQ03188 943 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 SFSWAPQ12872 951 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 PTK7Q13308 1070 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 MAP7Q14244 749 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 ADAT2Q7Z6V5 191 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 TRABD2AQ86V40 505 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 IRGQQ8WZA9 623 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 C18orf25Q96B23 403 aaPredicted RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 ZMAT2Q96NC0 199 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 SPATA16Q9BXB7 569 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 CXCL16Q9H2A7 254 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 EPB41L1Q9H4G0 881 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 SMYD3Q9H7B4 428 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 STARD7Q9NQZ5 370 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 NINJ2Q9NZG7 142 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 UVRAGQ9P2Y5 699 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 TUBGCP4Q9UGJ1 667 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 CHORDC1Q9UHD1 332 aaPredicted RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 UBQLN1Q9UMX0 589 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 COG5Q9UP83 839 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 CNTN6Q9UQ52 1028 aa15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 TRIP12Q14669 1992 aaPredicted RBP15.39■□□□□ 0.05
SEMA4D-204ENST00000420101 ENTPD5O75356 428 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 PIM1P11309 404 aaPredicted RBP15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 ATF7P17544 494 aaPredicted RBP15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 KRT17Q04695 432 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 RCN1Q15293 331 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 KHDC1Q4VXA5 237 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 RASIP1Q5U651 963 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 TRIM72Q6ZMU5 477 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 TRIM74Q86UV6 250 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 TRIM73Q86UV7 250 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 ZC3H18Q86VM9 953 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
SEMA4D-204ENST00000420101 ZNF606Q8WXB4 792 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms