RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CDK5RAP1Q96SZ6 601 aaKnown RBP19.57■□□□□ 0.72
PTCD3-204ENST00000418628 SYT11Q9BT88 431 aa19.57■□□□□ 0.72
PTCD3-204ENST00000418628 KLF16Q9BXK1 252 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-204ENST00000418628 EDEM3Q9BZQ6 932 aa19.57■□□□□ 0.72
PTCD3-204ENST00000418628 HPS4Q9NQG7 708 aa19.57■□□□□ 0.72
PTCD3-204ENST00000418628 IFNKQ9P0W0 207 aa19.57■□□□□ 0.72
PTCD3-204ENST00000418628 TJP2Q9UDY2 1190 aa19.57■□□□□ 0.72
PTCD3-204ENST00000418628 PRR33A8MZF0 331 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 ZNF263O14978 683 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 LSM8O95777 96 aaKnown RBP19.56■□□□□ 0.72
PTCD3-204ENST00000418628 LCP1P13796 627 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 NOMO3P69849 1222 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 MLF2Q15773 248 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-204ENST00000418628 PTPN20Q4JDL3 420 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 CWF19L1Q69YN2 538 aaKnown RBP19.56■□□□□ 0.72
PTCD3-204ENST00000418628 MSANTD2Q6P1R3 559 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 OSCP1Q8WVF1 389 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 ZFYVE19Q96K21 471 aa19.56■□□□□ 0.72
PTCD3-204ENST00000418628 ITIH6Q6UXX5 1313 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 FAM86C2PA6NEL3 165 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 PIK3R2O00459 728 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 PDGFBP01127 241 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-204ENST00000418628 CYP1A1P04798 512 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-204ENST00000418628 FYNP06241 537 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 MMEP08473 750 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 RALAP11233 206 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 KRT9P35527 623 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 ATP5C1P36542 298 aaKnown RBP19.55■□□□□ 0.72
PTCD3-204ENST00000418628 STARD6P59095 220 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 CDR2Q01850 454 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 EML3Q32P44 896 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 BSPRYQ5W0U4 402 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 E4F1Q66K89 784 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-204ENST00000418628 BEND5Q7L4P6 421 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 RNF214Q8ND24 703 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 WBP2Q969T9 261 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 CHFRQ96EP1 664 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 PIWIL1Q96J94 861 aaKnown RBP19.55■□□□□ 0.72
PTCD3-204ENST00000418628 XPO4Q9C0E2 1151 aaKnown RBP19.55■□□□□ 0.72
PTCD3-204ENST00000418628 SMPD4Q9NXE4 827 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 NUDT5Q9UKK9 219 aa19.55■□□□□ 0.72
PTCD3-204ENST00000418628 A0A1W2PQJ5 194 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 E2F8A0AVK6 867 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 MDM4O15151 490 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 SART1O43290 800 aaKnown RBP19.54■□□□□ 0.72
PTCD3-204ENST00000418628 LTFP02788 710 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 GABRB2P47870 512 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 PRKCQQ04759 706 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 PDGFRLQ15198 375 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 SLC44A4Q53GD3 710 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 C10orf120Q5SQS8 335 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 TAF3Q5VWG9 929 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 CACNA2D4Q7Z3S7 1137 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 IRF2BP2Q7Z5L9 587 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 TADA2BQ86TJ2 420 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 YAF2Q8IY57 180 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 SIX5Q8N196 739 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 TMEM35BQ8NCS4 154 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 PPP1R13BQ96KQ4 1090 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 ST7Q9NRC1 585 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 HEBP1Q9NRV9 189 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 ABCC13Q9NSE7 274 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 THG1LQ9NWX6 298 aaKnown RBP19.54■□□□□ 0.72
PTCD3-204ENST00000418628 CFAP97Q9P2B7 532 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 DNMT3LQ9UJW3 386 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 FBXL21Q9UKT6 434 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 CA14Q9ULX7 337 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 MUC6Q6W4X9 2439 aa19.54■□□□□ 0.72
PTCD3-204ENST00000418628 OTOL1A6NHN0 477 aaPredicted RBP19.53■□□□□ 0.72
PTCD3-204ENST00000418628 LRRC53A6NM62 1247 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 ERBB2P04626 1255 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 GLULP15104 373 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 FERP16591 822 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 TNK2Q07912 1038 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 TMEM31Q5JXX7 168 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 TRIM68Q6AZZ1 485 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 SARM1Q6SZW1 724 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 Q6ZNB5 142 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 SCUBE3Q8IX30 993 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 ZNF687Q8N1G0 1237 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 IQCDQ96DY2 449 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 NOX5Q96PH1 765 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 GKN1Q9NS71 199 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 OLA1Q9NTK5 396 aaKnown RBP19.53■□□□□ 0.72
PTCD3-204ENST00000418628 ASNSD1Q9NWL6 643 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 AIPL1Q9NZN9 384 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 CEP83Q9Y592 693 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 WNT6Q9Y6F9 365 aa19.53■□□□□ 0.72
PTCD3-204ENST00000418628 CACNA1HO95180 2353 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 ARSAP15289 507 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 PRKCIP41743 596 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 BTBD8Q5XKL5 378 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 TRIM72Q6ZMU5 477 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 FAM183BPQ6ZVS7 135 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 HTR3DQ70Z44 454 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 GAS2L3Q86XJ1 694 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 FMNL3Q8IVF7 1028 aa19.52■□□□□ 0.72
PTCD3-204ENST00000418628 ZNF397Q8NF99 534 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms