RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 EDEM1Q92611 657 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 RNF34Q969K3 372 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 ZNF707Q96C28 371 aaPredicted RBP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 MYRFLQ96LU7 910 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 MCEEQ96PE7 176 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 DESI2Q9BSY9 194 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 SYT11Q9BT88 431 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 TSGA10Q9BZW7 698 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 THAP2Q9H0W7 228 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 ISCUQ9H1K1 167 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRIM48-201ENST00000417545 CLEC1BQ9P126 229 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 TJP2Q9UDY2 1190 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 ZMYM5Q9UJ78 669 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 PCDHA13Q9Y5I0 950 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 USP3Q9Y6I4 520 aa8.87□□□□□ -0.99
TRIM48-201ENST00000417545 CHD7Q9P2D1 2997 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SYNJ2BP-COX16A0A087WUM0 186 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 YJEFN3A6XGL0 299 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 E7ENQ6 273 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 CCP110O43303 1012 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ZSCAN12O43309 604 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 TLR5O60602 858 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 HMGA1P17096 107 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 GJA1P17302 382 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ATP5C1P36542 298 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SCNN1AP37088 669 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SSR1P43307 286 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 GABRB2P47870 512 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SULT1E1P49888 294 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 VAV2P52735 878 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 DLX2Q07687 328 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 EFEMP1Q12805 493 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SMAD4Q13485 552 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 CBX2Q14781 532 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 TEAD2Q15562 447 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 AAK1Q2M2I8 961 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 CTC1Q2NKJ3 1217 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ASTE1Q2TB18 679 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 PUS10Q3MIT2 529 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ARHGAP29Q52LW3 1261 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 PM20D1Q6GTS8 502 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 OLFML1Q6UWY5 402 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SLC26A9Q7LBE3 791 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 MIB1Q86YT6 1006 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 TMC8Q8IU68 726 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 TMEM139Q8IV31 216 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 SPNS2Q8IVW8 549 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 RHOT2Q8IXI1 618 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 MAB21L3Q8N8X9 362 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ZNF564Q8TBZ8 553 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ACSF2Q96CM8 615 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 MCRS1Q96EZ8 462 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ZNF830Q96NB3 372 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 NUP85Q9BW27 656 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ASNSD1Q9NWL6 643 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 RRN3Q9NYV6 651 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 CLIC5Q9NZA1 410 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 COX16Q9P0S2 106 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 ANAPC7Q9UJX3 599 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 LSM7Q9UK45 103 aaKnown RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 INTUQ9ULD6 942 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 USP15Q9Y4E8 981 aaPredicted RBP8.86□□□□□ -0.99
TRIM48-201ENST00000417545 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
TRIM48-201ENST00000417545 DENND4CQ5VZ89 1909 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 NCANO14594 1321 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 TMEM110-MUSTN1A8MSY1 372 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 KRT86O43790 486 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 RNF8O76064 485 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 F11P03951 625 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 HMBSP08397 361 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 IRF1P10914 325 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 PDGFRAP16234 1089 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 CEBPBP17676 345 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 HDCP19113 662 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 GPD1P21695 349 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 SP100P23497 879 aaPredicted RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 PSMA2P25787 234 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 NOS2P35228 1153 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 RPL34P49207 117 aaKnown RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 CCZ1BP86790 482 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 CDO1Q16878 200 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 ODF2Q5BJF6 829 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 ZFYVE27Q5T4F4 411 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 TXNDC8Q6A555 127 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 DDX42Q86XP3 938 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 DEFB106AQ8N104 65 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 EMC1Q8N766 993 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 TDRD5Q8NAT2 981 aaKnown RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 SMRP1Q8NCR6 262 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 SHKBP1Q8TBC3 707 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 FEZF2Q8TBJ5 459 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 RFFLQ8WZ73 363 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 TCEAL4Q96EI5 215 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 MSLNLQ96KJ4 702 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 SERPINB11Q96P15 392 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 PACSIN1Q9BY11 444 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 CCSER2Q9H7U1 834 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms