RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
DDR1-231ENST00000417521 CD19P15391 556 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 HOXA6P31267 233 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 BCAT1P54687 386 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 KRT31Q15323 416 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 MAN2A1Q16706 1144 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 NAIF1Q69YI7 327 aaPredicted RBP17.23■□□□□ 0.35
DDR1-231ENST00000417521 RHBDF2Q6PJF5 856 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 TMEM270Q6UE05 265 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 HTR3DQ70Z44 454 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 SCD5Q86SK9 330 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 TADA2BQ86TJ2 420 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 CCDC26Q8TAB7 109 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 CDK5RAP1Q96SZ6 601 aaKnown RBP17.23■□□□□ 0.35
DDR1-231ENST00000417521 KLF16Q9BXK1 252 aaPredicted RBP17.23■□□□□ 0.35
DDR1-231ENST00000417521 NAGPAQ9UK23 515 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 PCDHB4Q9Y5E5 795 aa17.23■□□□□ 0.35
DDR1-231ENST00000417521 TICRRQ7Z2Z1 1910 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
DDR1-231ENST00000417521 CHURC1-FNTBB4DL54 471 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 O00370 1275 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 XPO1O14980 1071 aaKnown RBP17.22■□□□□ 0.35
DDR1-231ENST00000417521 ADH1CP00326 375 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 RALAP11233 206 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
DDR1-231ENST00000417521 OPRD1P41143 372 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 PDE4CQ08493 712 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 BST2Q10589 180 aaKnown RBP17.22■□□□□ 0.35
DDR1-231ENST00000417521 GOLGA7BQ2TAP0 167 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 GAB4Q2WGN9 574 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 MIIPQ5JXC2 388 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 ARHGAP18Q8N392 663 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 RNF214Q8ND24 703 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 KAT5Q92993 513 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 DNMT3LQ9UJW3 386 aa17.22■□□□□ 0.35
DDR1-231ENST00000417521 VPS13AQ96RL7 3174 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 K7ESF4 209 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 SCAMP3O14828 347 aaKnown RBP17.21■□□□□ 0.35
DDR1-231ENST00000417521 RNF40O75150 1001 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 EIF2DP41214 584 aaKnown RBP17.21■□□□□ 0.35
DDR1-231ENST00000417521 PLA2G4AP47712 749 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 GOLGA8FQ08AF8 430 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 GOLGA8DPQ0D2H9 430 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 STILQ15468 1287 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 CNGA2Q16280 664 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 VWA3BQ502W6 1294 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 C10orf120Q5SQS8 335 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 PM20D1Q6GTS8 502 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 LCLAT1Q6UWP7 414 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 RRAGAQ7L523 313 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 ARHGEF19Q8IW93 802 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
DDR1-231ENST00000417521 VPS16Q9H269 839 aa17.21■□□□□ 0.35
DDR1-231ENST00000417521 LIMA1Q9UHB6 759 aaKnown RBP17.21■□□□□ 0.35
DDR1-231ENST00000417521 PTPRZ1P23471 2315 aaPredicted RBP17.21■□□□□ 0.35
DDR1-231ENST00000417521 RNF225M0QZC1 329 aaPredicted RBP17.2■□□□□ 0.34
DDR1-231ENST00000417521 GREM1O60565 184 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 ZBED1O96006 694 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 SETSIPP0DME0 302 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 TKTL1P51854 596 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 GAD2Q05329 585 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 PKDCCQ504Y2 493 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 LY6G5CQ5SRR4 150 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 BBS7Q8IWZ6 715 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 KCTD13Q8WZ19 329 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 TFAP2BQ92481 460 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 EZH1Q92800 747 aaPredicted RBP17.2■□□□□ 0.34
DDR1-231ENST00000417521 WBP2Q969T9 261 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 EPC1Q9H2F5 836 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 NDST4Q9H3R1 872 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 LRRC4Q9HBW1 653 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 C2orf42Q9NWW7 574 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 LSM7Q9UK45 103 aaKnown RBP17.2■□□□□ 0.34
DDR1-231ENST00000417521 CNTN6Q9UQ52 1028 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 GREB1Q4ZG55 1949 aa17.2■□□□□ 0.34
DDR1-231ENST00000417521 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 TULP2O00295 520 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 PES1O00541 588 aaKnown RBP17.19■□□□□ 0.34
DDR1-231ENST00000417521 IRF1P10914 325 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 ADH5P11766 374 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 PKN3Q6P5Z2 889 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 ENOSF1Q7L5Y1 443 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 APTXQ7Z2E3 356 aaKnown RBP17.19■□□□□ 0.34
DDR1-231ENST00000417521 GAS2L3Q86XJ1 694 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 RBBP8NLQ8NC74 664 aaPredicted RBP17.19■□□□□ 0.34
DDR1-231ENST00000417521 UBA3Q8TBC4 463 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 FAM81BQ96LP2 452 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 KREMEN1Q96MU8 473 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 SPHK2Q9NRA0 654 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 NUDT5Q9UKK9 219 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 DENND4CQ5VZ89 1909 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 OBSL1O75147 1896 aa17.19■□□□□ 0.34
DDR1-231ENST00000417521 KIF26AQ9ULI4 1882 aaPredicted RBP17.19■□□□□ 0.34
DDR1-231ENST00000417521 A0A0A0MRY4 1105 aa17.18■□□□□ 0.34
DDR1-231ENST00000417521 GTPBP10A4D1E9 387 aaKnown RBP17.18■□□□□ 0.34
DDR1-231ENST00000417521 HOXC11O43248 304 aaPredicted RBP17.18■□□□□ 0.34
DDR1-231ENST00000417521 CNR2P34972 360 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms