RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CDK16Q00536 496 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 SH3D19Q5HYK7 790 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 MROH9Q5TGP6 573 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 ZNF398Q8TD17 642 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 FAM172AQ8WUF8 416 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 SPDL1Q96EA4 605 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 NSL1Q96IY1 281 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 ACAP3Q96P50 834 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 TLE6Q9H808 572 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 POPDC2Q9HBU9 364 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 PIH1D1Q9NWS0 290 aaKnown RBP15.05■□□□□ 0
HDAC9-208ENST00000417496 DNAH12Q6ZR08 3092 aa15.05■□□□□ 0
HDAC9-208ENST00000417496 LGR5O75473 907 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 NEBLO76041 1014 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 IL18RAPO95256 599 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 METTL18O95568 372 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 ZBED1O96006 694 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 CSH1P0DML2 217 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 CSH2P0DML3 217 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 TXNP10599 105 aaKnown RBP15.05■□□□□ -0
HDAC9-208ENST00000417496 VDRP11473 427 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 PPP1R26Q5T8A7 1209 aaPredicted RBP15.05■□□□□ -0
HDAC9-208ENST00000417496 UNC5BQ8IZJ1 945 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 DTX3LQ8TDB6 740 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 C20orf27Q9GZN8 174 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 LRRC42Q9Y546 428 aa15.05■□□□□ -0
HDAC9-208ENST00000417496 FCHO1O14526 889 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 CHADO15335 359 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 HCRTO43612 131 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 KRT36O76013 467 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ARF4P18085 180 aaPredicted RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 TFDP2Q14188 446 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ACSBG2Q5FVE4 666 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ZCCHC23Q6ZST2 131 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 PLPPR4Q7Z2D5 763 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ACOT1Q86TX2 421 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 VPS52Q8N1B4 723 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 OTUD5Q96G74 571 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 OXNAD1Q96HP4 312 aaPredicted RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 FAXDC2Q96IV6 333 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 PDZD7Q9H5P4 517 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ETNK2Q9NVF9 386 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 SLC17A6Q9P2U8 582 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 EVPLQ92817 2033 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 SLC15A5A6NIM6 579 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 GABBR2O75899 941 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ESRRAP11474 423 aaPredicted RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 INSRRP14616 1297 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 TMPRSS15P98073 1019 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 GBE1Q04446 702 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 BST1Q10588 318 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ACAP1Q15027 740 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 RCN1Q15293 331 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 AMHR2Q16671 573 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 GOLGA7BQ2TAP0 167 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 WASHC2DQ5SRD0 308 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 TTC39BQ5VTQ0 682 aaPredicted RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 UNC5AQ6ZN44 842 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 CHSY1Q86X52 802 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 ARID3BQ8IVW6 561 aaPredicted RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 ENDOVQ8N8Q3 282 aaKnown RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 CLEC4CQ8WTT0 213 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 SNRNP25Q9BV90 132 aaKnown RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 PCDH18Q9HCL0 1135 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 PAK5Q9P286 719 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 BARX2Q9UMQ3 279 aaPredicted RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 AKT3Q9Y243 479 aa15.04■□□□□ -0
HDAC9-208ENST00000417496 MTO1Q9Y2Z2 717 aaKnown RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.04■□□□□ -0
HDAC9-208ENST00000417496 HMX2A2RU54 273 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 APOL1O14791 398 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 PPEF2O14830 753 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 GAS2O43903 313 aaKnown RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 RFPL1O75677 317 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 OSBPP22059 807 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 CRADDP78560 199 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 SLC10A2Q12908 348 aaPredicted RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 TMEM132DQ14C87 1099 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 FAM47CQ5HY64 1035 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 TTC30AQ86WT1 665 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -0
HDAC9-208ENST00000417496 MCUR1Q96AQ8 359 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 BATF3Q9NR55 127 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 PCMTD2Q9NV79 361 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 PLLPQ9Y342 182 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 MFHAS1Q9Y4C4 1052 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 SMAPO00193 183 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 CNMDO75829 334 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 SMNDC1O75940 238 aaKnown RBP eCLIP15.03■□□□□ -0
HDAC9-208ENST00000417496 C22orf31O95567 290 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 SNRPAP09012 282 aaKnown RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 CHI3L2Q15782 390 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 NOL9Q5SY16 702 aaKnown RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 MOB2Q70IA6 237 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 TREML1Q86YW5 311 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 CLMNQ96JQ2 1002 aa15.03■□□□□ -0
HDAC9-208ENST00000417496 MRPL45Q9BRJ2 306 aaKnown RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 TRIM6Q9C030 488 aaPredicted RBP15.03■□□□□ -0
HDAC9-208ENST00000417496 SLC24A3Q9HC58 644 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms