RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PFKFB1P16118 471 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 PTGER3P43115 390 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 ANO4Q32M45 955 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 PREPLQ4J6C6 727 aaPredicted RBP15.66■□□□□ 0.1
RPS28-201ENST00000417088 C10orf76Q5T2E6 689 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 CEP135Q66GS9 1140 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 GPRIN1Q7Z2K8 1008 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 MIB1Q86YT6 1006 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 PGBD3Q8N328 593 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 ZNF513Q8N8E2 541 aaPredicted RBP15.66■□□□□ 0.1
RPS28-201ENST00000417088 TERB1Q8NA31 727 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 TWNKQ96RR1 684 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 TLR8Q9NR97 1041 aaKnown RBP15.66■□□□□ 0.1
RPS28-201ENST00000417088 OSER1Q9NX31 292 aa15.66■□□□□ 0.1
RPS28-201ENST00000417088 EVLQ9UI08 416 aaPredicted RBP15.66■□□□□ 0.1
RPS28-201ENST00000417088 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 HHLA1C9JL84 531 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 FAM200BP0CF97 657 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 ADORA2BP29275 332 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 PIK3CAP42336 1068 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 BYSLQ13895 437 aaKnown RBP15.65■□□□□ 0.1
RPS28-201ENST00000417088 SH3PXD2AQ5TCZ1 1133 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 CLEC20AQ6ZU45 233 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 ARMCX6Q7L4S7 300 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 HNRNPABQ99729 332 aaKnown RBP15.65■□□□□ 0.1
RPS28-201ENST00000417088 CYLDQ9NQC7 956 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.65■□□□□ 0.1
RPS28-201ENST00000417088 TMEM74BQ9NUR3 256 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 USP25Q9UHP3 1055 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 SCML2Q9UQR0 700 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 TRAF3IP3Q9Y228 551 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 FRMD4BQ9Y2L6 1034 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 STARD13Q9Y3M8 1113 aa15.65■□□□□ 0.1
RPS28-201ENST00000417088 CALUO43852 315 aaPredicted RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 MYL1P05976 194 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 GABRG2P18507 467 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 CSRP1P21291 193 aaKnown RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 CMA1P23946 247 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 ATP5C1P36542 298 aaKnown RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 WASP42768 502 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 VAMP7P51809 220 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 INCA1Q0VD86 236 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 TRIM61Q5EBN2 209 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 SPDYCQ5MJ68 293 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 EGFLAMQ63HQ2 1017 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 GRAMD4Q6IC98 578 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 NUDT18Q6ZVK8 323 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 TRMT11Q7Z4G4 463 aaKnown RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 SYT12Q8IV01 421 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 CYFIP2Q96F07 1278 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 NMUR1Q9HB89 426 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 APOBEC3GQ9HC16 384 aaKnown RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 DNAJC17Q9NVM6 304 aaKnown RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 HPSEQ9Y251 543 aa15.64■□□□□ 0.09
RPS28-201ENST00000417088 ASCC3Q8N3C0 2202 aaKnown RBP15.64■□□□□ 0.09
RPS28-201ENST00000417088 ZFHX4Q86UP3 3567 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 A0A1W2PQF6 199 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 NEDD8-MDP1E9PL57 170 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 MAPK13O15264 365 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 CYP26A1O43174 497 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 CACNG3O60359 315 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 HOXB2P14652 356 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 ACO1P21399 889 aaKnown RBP15.63■□□□□ 0.09
RPS28-201ENST00000417088 NTSR1P30989 418 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 PPP3CAQ08209 521 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 ZNF252P-AS1Q0IIN9 211 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 LMAN2Q12907 356 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 UAP1L1Q3KQV9 507 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 LYSMD4Q5XG99 296 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 TPGS1Q6ZTW0 290 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 ACOX2Q99424 681 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 BBS2Q9BXC9 721 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 NT5C1AQ9BXI3 368 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 NUSAP1Q9BXS6 441 aaKnown RBP15.63■□□□□ 0.09
RPS28-201ENST00000417088 CYP3A43Q9HB55 503 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 CD248Q9HCU0 757 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 PNPLA8Q9NP80 782 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPS28-201ENST00000417088 MARK1Q9P0L2 795 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 LSM7Q9UK45 103 aaKnown RBP15.63■□□□□ 0.09
RPS28-201ENST00000417088 NUDT5Q9UKK9 219 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 PCDHA5Q9Y5H7 936 aa15.63■□□□□ 0.09
RPS28-201ENST00000417088 PI4KAP42356 2102 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 CHD6Q8TD26 2715 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 MYH10P35580 1976 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 FRYQ5TBA9 3013 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 A0A1W2PQH9 124 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 PRRT4C9JH25 899 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 MDM4O15151 490 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 CILPO75339 1184 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 RHOBTB3O94955 611 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 TRIM49P0CI25 452 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 TRIM49CP0CI26 452 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 RARGP13631 454 aa15.62■□□□□ 0.09
RPS28-201ENST00000417088 CEACAM1P13688 526 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms