RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	LY6G5C	Q5SRR4	150 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	PRAMEF14	Q5SWL7	426 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	DIEXF	Q68CQ4	756 aa	Known RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	JADE1	Q6IE81	842 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	GALNT17	Q6IS24	598 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	SLC36A4	Q6YBV0	504 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	LRRC69	Q6ZNQ3	347 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	OSTM1	Q86WC4	334 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	GALNT15	Q8N3T1	639 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	ZNF513	Q8N8E2	541 aa	Predicted RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	C1orf216	Q8TAB5	229 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	IPO4	Q8TEX9	1081 aa	Known RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	P2RY11	Q96G91	374 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	PYM1	Q9BRP8	204 aa	Known RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	GPR174	Q9BXC1	333 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	OXCT2	Q9BYC2	517 aa	Predicted RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	TUFT1	Q9NNX1	390 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	MKL2	Q9ULH7	1088 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	UBQLN1	Q9UMX0	589 aa	Known RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	ARHGAP26	Q9UNA1	814 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	SNX11	Q9Y5W9	270 aa		9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	UBR5	O95071	2799 aa	Predicted RBP	9.28	□□□□□ -0.92
NIF3L1-206	ENST00000416651	TCHH	Q07283	1943 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651		A0A1B0GTW7	788 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MYMK	A6NI61	221 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CTDNEP1	O95476	244 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CSH1	P0DML2	217 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CSH2	P0DML3	217 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CYP3A5	P20815	502 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	GRIA2	P42262	883 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MATK	P42679	507 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RAD51AP2	Q09MP3	1159 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	BYSL	Q13895	437 aa	Known RBP	9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KIF19	Q2TAC6	998 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ARHGAP40	Q5TG30	622 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SPATA1	Q5VX52	437 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KCNK18	Q7Z418	384 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FBXL16	Q8N461	479 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SPATA18	Q8TC71	538 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SPPL2B	Q8TCT7	592 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	EXOC4	Q96A65	974 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TOE1	Q96GM8	510 aa	Known RBP	9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MRGPRX1	Q96LB2	322 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PKMYT1	Q99640	499 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	IKZF4	Q9H2S9	585 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TMEM206	Q9H813	350 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KMT5A	Q9NQR1	393 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	EIF2B4	Q9UI10	523 aa	Known RBP	9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PCDHB5	Q9Y5E4	795 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CPQ	Q9Y646	472 aa		9.27	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FLNC	Q14315	2725 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ANO9	A1A5B4	782 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TBC1D3B	A6NDS4	549 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TISP43	B9A030	160 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PRRT4	C9JH25	899 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	BRINP1	O60477	761 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NEMF	O60524	1076 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ATP2C2	O75185	946 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NDUFS2	O75306	463 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TULP3	O75386	442 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TOM1L1	O75674	476 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	HMGB1	P09429	215 aa	Known RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NCAM1	P13591	858 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FDPS	P14324	419 aa	Known RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TCF3	P15923	654 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	COL8A1	P27658	744 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RPA1	P27694	616 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MCM7	P33993	719 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TNFRSF4	P43489	277 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MCL1	Q07820	350 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KRT32	Q14532	448 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	C10orf76	Q5T2E6	689 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	DCAF12L1	Q5VU92	463 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	HIST2H2BC	Q6DN03	193 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KIAA1324	Q6UXG2	1013 aa	Known RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	RABEPK	Q7Z6M1	372 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ERICH1	Q86X53	443 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CACUL1	Q86Y37	369 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	GATAD2A	Q86YP4	633 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SCN4B	Q8IWT1	228 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	ETFBKMT	Q8IXQ9	262 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	DNASE2B	Q8WZ79	361 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	TTC9	Q92623	222 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KIFAP3	Q92845	792 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MYRFL	Q96LU7	910 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KRTAP9-2	Q9BYQ4	174 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	FAM124B	Q9H5Z6	455 aa	Predicted RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	WSB2	Q9NYS7	404 aa	Predicted RBP	9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	CFAP97	Q9P2B7	532 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	GTF3C4	Q9UKN8	822 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	KIAA1024	Q9UPX6	916 aa		9.26	□□□□□ -0.93
NIF3L1-206	ENST00000416651	UTP20	O75691	2785 aa	Known RBP	9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MYO9A	B2RTY4	2548 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	NPHP3-ACAD11	A0A0J9YXS1	232 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	PP2D1	A8MPX8	630 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	MEI4	A8MW99	385 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651	SHISA8	B8ZZ34	492 aa		9.25	□□□□□ -0.93
NIF3L1-206	ENST00000416651		H0Y8X5	98 aa		9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms