RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TMEM132DQ14C87 1099 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 SPRED3Q2MJR0 410 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 TTC23LQ6PF05 361 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 ACOT1Q86TX2 421 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 ATPAF2Q8N5M1 289 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 GDPD5Q8WTR4 605 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 GFM2Q969S9 779 aaKnown RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 THUMPD3Q9BV44 507 aaKnown RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 PKP3Q9Y446 797 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 ZNF23P17027 643 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 TGM2P21980 687 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 MRPS22P82650 360 aaKnown RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 NFIL3Q16649 462 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 NRF1Q16656 503 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 Q4G0T1 1027 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 N4BP2L1Q5TBK1 243 aaPredicted RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 CYP2R1Q6VVX0 501 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 UTS2BQ765I0 119 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 GRIP2Q9C0E4 1043 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 NMRK1Q9NWW6 199 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 KCNK1O00180 336 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 SPAG6O75602 509 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 TPH1P17752 444 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 GPD1P21695 349 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 BST1Q10588 318 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 CCNJLQ8IV13 435 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 TUBGCP3Q96CW5 907 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 SEMA6AQ9H2E6 1030 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 PLA2G4CQ9UP65 541 aa13.3□□□□□ -0.28
SCN1B-202ENST00000415950 URB1O60287 2271 aaKnown RBP13.3□□□□□ -0.28
SCN1B-202ENST00000415950 NPTXRO95502 500 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 RALBP11234 206 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 RAG1P15918 1043 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 GRIK1P39086 918 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 DRG2P55039 364 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 CCDC15Q0P6D6 951 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 PTK6Q13882 451 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 UBAP2LQ14157 1087 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 SLC35G1Q2M3R5 365 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 ASTE1Q2TB18 679 aaPredicted RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 PATL1Q86TB9 770 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 FAM162AQ96A26 154 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 KREMEN1Q96MU8 473 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 APOL5Q9BWW9 433 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 CD274Q9NZQ7 290 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 FGFR3P22607 806 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 CLCN3P51790 818 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 RUNX1T1Q06455 604 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 TTC39CQ8N584 583 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 ZNF70Q9UC06 446 aaPredicted RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 WBP4O75554 376 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 LCA5LO95447 670 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 BNIP1Q12981 228 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 ZNF677Q86XU0 584 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 MIER2Q8N344 545 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 DDHD1Q8NEL9 900 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 ZNF560Q96MR9 790 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 BRD8Q9H0E9 1235 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 SOX13Q9UN79 622 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 SPATA31A6Q5VVP1 1343 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 MGRN1O60291 552 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 CHRM3P20309 590 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 CDK16Q00536 496 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 TRMT5Q32P41 509 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
SCN1B-202ENST00000415950 GSTCDQ8NEC7 633 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 BHMTQ93088 406 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 C17orf80Q9BSJ5 609 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 TEX12Q9BXU0 123 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 KLHL4Q9C0H6 718 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 LRRC4CQ9HCJ2 640 aa13.29□□□□□ -0.28
SCN1B-202ENST00000415950 AFF2P51816 1311 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 FAM155BO75949 473 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 HIRAP54198 1017 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 KCNK10P57789 538 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 SLC45A4Q5BKX6 768 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 IRGCQ6NXR0 463 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 TTC7BQ86TV6 843 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms