RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 TNFRSF4P43489 277 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 GCLMP48507 274 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 VAMP7P51809 220 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 KDSRQ06136 332 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 MAP7D1Q3KQU3 841 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 AASDHQ4L235 1098 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 CEP135Q66GS9 1140 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 ACOX2Q99424 681 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 CYLDQ9NQC7 956 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 SPHK2Q9NRA0 654 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 NUDT5Q9UKK9 219 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 A0A1W2PQF6 199 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 LNP1A1A4G5 178 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 PRRT4C9JH25 899 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 GIPC1O14908 333 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 MDM4O15151 490 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 CYP26A1O43174 497 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 TLR5O60602 858 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 CILPO75339 1184 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 CAVIN2O95810 425 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 KLKB1P03952 638 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 MYL1P05976 194 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 CISD3P0C7P0 127 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 ADORA2BP29275 332 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 GRIA2P42262 883 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 CREB5Q02930 508 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 GAD2Q05329 585 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 OTUB2Q96DC9 234 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 TBC1D14Q9P2M4 693 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 WASF3Q9UPY6 502 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
NCKIPSD-203ENST00000415281 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 KCNK5O95279 499 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 APODP05090 189 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 IRF1P10914 325 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 PTGER3P43115 390 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 KIF11P52732 1056 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 IRX4P78413 519 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 PNOCQ13519 176 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 PPP1R26Q5T8A7 1209 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 Q6ZNB5 142 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 TOGARAM2Q6ZUX3 1019 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 DDX42Q86XP3 938 aaKnown RBP eCLIP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 SMYD4Q8IYR2 804 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 GUF1Q8N442 669 aaKnown RBP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 CCDC47Q96A33 483 aaKnown RBP13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 EEF2KMTQ96G04 330 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 CCDC34Q96HJ3 373 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
NCKIPSD-203ENST00000415281 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 C4orf47A7E2U8 309 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 ADH1CP00326 375 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 GABRG2P18507 467 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 NR2F2P24468 414 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 PI4KAP42356 2102 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 ENPEPQ07075 957 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 KIAA1211LQ6NV74 962 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 TERB1Q8NA31 727 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 SLC4A11Q8NBS3 891 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 TATDN2Q93075 761 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 ARID3AQ99856 593 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 CD93Q9NPY3 652 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 MARK1Q9P0L2 795 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 ATP8B3O60423 1300 aa13.11□□□□□ -0.31
NCKIPSD-203ENST00000415281 CEP295Q9C0D2 2601 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 TULP2O00295 520 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CALUO43852 315 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CACNG3O60359 315 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 RARGP13631 454 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CD58P19256 250 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 GBP1P32455 592 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 PIK3CAP42336 1068 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 WASP42768 502 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 RAD23BP54727 409 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 UBE2HP62256 183 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 ADAM9Q13443 819 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 ELF2Q15723 593 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 HSF5Q4G112 596 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 PEAR1Q5VY43 1037 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 EGFLAMQ63HQ2 1017 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 RNF43Q68DV7 783 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms