RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 HDCP19113 662 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 SSTR3P32745 418 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 NSFP46459 744 aaKnown RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 PGFP49763 221 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 IFRD2Q12894 506 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ZNF77Q15935 545 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ASTE1Q2TB18 679 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 EFHC1Q5JVL4 640 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 NAA35Q5VZE5 725 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 BSPRYQ5W0U4 402 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 XYLT1Q86Y38 959 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 GJD3Q8N144 294 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 CELF5Q8N6W0 485 aaKnown RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ADAMTS19Q8TE59 1207 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 CPLX3Q8WVH0 158 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 GOLGA1Q92805 767 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 FGF14Q92915 247 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 USP13Q92995 863 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 SLC2A13Q96QE2 648 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 SLC22A12Q96S37 553 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ISCUQ9H1K1 167 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 SLITRK6Q9H5Y7 841 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 KCNK12Q9HB15 430 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 POPDC2Q9HBU9 364 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ZFP14Q9HCL3 533 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 TDP1Q9NUW8 608 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 CHORDC1Q9UHD1 332 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-207ENST00000415107 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
ATG4B-207ENST00000415107 TCRBV5S1A1TA0A578 114 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.412e-7■■□□□ 13.3
ATG4B-207ENST00000415107 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 FYNP06241 537 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 ATP5C1P36542 298 aaKnown RBP12.48□□□□□ -0.41
ATG4B-207ENST00000415107 YWHAZP63104 245 aaKnown RBP12.48□□□□□ -0.41
ATG4B-207ENST00000415107 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-207ENST00000415107 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
ATG4B-207ENST00000415107 TDRD12Q587J7 1177 aaKnown RBP12.48□□□□□ -0.41
ATG4B-207ENST00000415107 BTBD8Q5XKL5 378 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 ACAD10Q6JQN1 1059 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 PARM1Q6UWI2 310 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 FAM183BPQ6ZVS7 135 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 CPA5Q8WXQ8 436 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 KHSRPQ92945 711 aaKnown RBP eCLIP12.48□□□□□ -0.413e-7■■□□□ 12.3
ATG4B-207ENST00000415107 NT5C3BQ969T7 300 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-207ENST00000415107 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 SMOC2Q9H3U7 446 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 RRN3Q9NYV6 651 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 SORCS3Q9UPU3 1222 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 NUMBLQ9Y6R0 609 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 NCOR1O75376 2440 aa12.48□□□□□ -0.41
ATG4B-207ENST00000415107 RTN2O75298 545 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 DAB1O75553 588 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 IGLV3-25P01717 112 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 MYBL1P10243 752 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 PSMC3P17980 439 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 MRE11P49959 708 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 KPNA1P52294 538 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-207ENST00000415107 COG7P83436 770 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 RING1Q06587 406 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 SLC18A3Q16572 532 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 HFE2Q6ZVN8 426 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-207ENST00000415107 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 TRIM11Q96F44 468 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 PGAP3Q96FM1 320 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-207ENST00000415107 PIWIL1Q96J94 861 aaKnown RBP12.47□□□□□ -0.41
ATG4B-207ENST00000415107 TRPC7Q9HCX4 862 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 SLC2A4RGQ9NR83 387 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 ADAM22Q9P0K1 906 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 TMEM59LQ9UK28 342 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 HBS1LQ9Y450 684 aaKnown RBP12.47□□□□□ -0.41
ATG4B-207ENST00000415107 COL4A2P08572 1712 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
ATG4B-207ENST00000415107 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
ATG4B-207ENST00000415107 E2F8A0AVK6 867 aa12.46□□□□□ -0.41
ATG4B-207ENST00000415107 HEPACAM2A8MVW5 462 aa12.46□□□□□ -0.41
ATG4B-207ENST00000415107 ARNTLO00327 626 aa12.46□□□□□ -0.41
ATG4B-207ENST00000415107 CHADO15335 359 aa12.46□□□□□ -0.41
ATG4B-207ENST00000415107 GREM1O60565 184 aa12.46□□□□□ -0.41
ATG4B-207ENST00000415107 LATS1O95835 1130 aa12.46□□□□□ -0.41
ATG4B-207ENST00000415107 IGLV3-27P01718 113 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms