RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RAB6CQ53S08 254 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 SH3PXD2AQ5TCZ1 1133 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 NT5DC3Q86UY8 548 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 FAM149B1Q96BN6 582 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 C8orf48Q96LL4 319 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 PSMB7Q99436 277 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 ADAM33Q9BZ11 813 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 RAB6CQ9H0N0 254 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 CYP4F11Q9HBI6 524 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHMT2-202ENST00000414700 USP3Q9Y6I4 520 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 DOCK6Q96HP0 2047 aa16.25■□□□□ 0.19
SHMT2-202ENST00000414700 EPOPA6NHQ4 379 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 TGM5O43548 720 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 ZBED1O96006 694 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 RB1P06400 928 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 COMTP21964 271 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 PPP2R2DQ66LE6 453 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 C11orf63Q6NUN7 778 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 SLC26A9Q7LBE3 791 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 ZDHHC17Q8IUH5 632 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 MRPL43Q8N983 215 aaKnown RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 GIPC2Q8TF65 315 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 C2orf15Q8WU43 125 aaKnown RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 CFAP57Q96MR6 1250 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 NAPGQ99747 312 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 PLEKHA4Q9H4M7 779 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 CNGB3Q9NQW8 809 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 STK39Q9UEW8 545 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 IRAK3Q9Y616 596 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 PRUNE2Q8WUY3 3088 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 C2CD4BA6NLJ0 364 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 SHOX2O60902 331 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 SYF2O95926 243 aaKnown RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 MCM3P25205 808 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 SNX16P57768 344 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 C15orf59Q2T9L4 293 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-202ENST00000414700 MEI1Q5TIA1 1274 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 TPGS2Q68CL5 300 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 PEX26Q7Z412 305 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 GPR65Q8IYL9 337 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 NUP93Q8N1F7 819 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 ARFGAP1Q8N6T3 406 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 MICAL1Q8TDZ2 1067 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 RXFP2Q8WXD0 754 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 ARNTL2Q8WYA1 636 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 KLHL5Q96PQ7 755 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 CXorf56Q9H5V9 222 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 USTQ9Y2C2 406 aa16.24■□□□□ 0.19
SHMT2-202ENST00000414700 H3BNC9 293 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 CLGNO14967 610 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 PROSCO94903 275 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 FYNP06241 537 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 MARCKSL1P49006 195 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 PITX1P78337 314 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-202ENST00000414700 GPM6BQ13491 265 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 MAP9Q49MG5 647 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 PM20D1Q6GTS8 502 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 DENND5BQ6ZUT9 1274 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 MSRAQ9UJ68 235 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 UNC80Q8N2C7 3258 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 MTCL1Q9Y4B5 1905 aaKnown RBP16.23■□□□□ 0.19
SHMT2-202ENST00000414700 SRGAP2O75044 1071 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 PDGFRAP16234 1089 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 PSMA2P25787 234 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 CXCR5P32302 372 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 YWHAZP63104 245 aaKnown RBP16.23■□□□□ 0.19
SHMT2-202ENST00000414700 UBE3AQ05086 875 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 CDO1Q16878 200 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 SYPL2Q5VXT5 272 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 SYCE1Q8N0S2 351 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 GDPD5Q8WTR4 605 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 KRT35Q92764 455 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 PRO3102Q9H379 93 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 SLC28A3Q9HAS3 691 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 IP6K2Q9UHH9 426 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 SSX2IPQ9Y2D8 614 aa16.23■□□□□ 0.19
SHMT2-202ENST00000414700 FSCN2O14926 492 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 FBXO21O94952 628 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 KLRC2P26717 231 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 ATP11AP98196 1134 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 RAB30Q15771 203 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 CCDC14Q49A88 953 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 EFHC1Q5JVL4 640 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 DEFB106AQ8N104 65 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 EDEM1Q92611 657 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 CD101Q93033 1021 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 NMUR1Q9HB89 426 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 HPCAL4Q9UM19 191 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 NAALADL1Q9UQQ1 740 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 YIPF1Q9Y548 306 aa16.22■□□□□ 0.19
SHMT2-202ENST00000414700 RFXAPO00287 272 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 PRRG1O14668 218 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 SPOPO43791 374 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 HSF2BPO75031 334 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 ADH1AP07327 375 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 GPD1P21695 349 aa16.21■□□□□ 0.19
SHMT2-202ENST00000414700 SCNN1AP37088 669 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms