RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 MARK1Q9P0L2 795 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 SAMD15Q9P1V8 674 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 MOSPD1Q9UJG1 213 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 LRRC14BA6NHZ5 514 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 RBAK-RBAKDNI3L0D1 243 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 EML1O00423 815 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 MEIS1O00470 390 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 LAD1O00515 517 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 FSCN2O14926 492 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 RIPK2O43353 540 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 HRGP04196 525 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CYP3A4P08684 503 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 GAP43P17677 238 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CIITAP33076 1130 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 ALDH3A2P51648 485 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 ARFIP1P53367 373 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 NR1H2P55055 460 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SPIRE1Q08AE8 756 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SSPNQ14714 243 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 Q4G0T1 1027 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 KRBOX4Q5JUW0 171 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 C11orf88Q6PI97 169 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CEP97Q8IW35 865 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 MFN1Q8IWA4 741 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 PEX5LQ8IYB4 626 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 GBP7Q8N8V2 638 aaPredicted RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 MS4A14Q96JA4 679 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SH3GL1Q99961 368 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 ACAT2Q9BWD1 397 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 MRPL4Q9BYD3 311 aaKnown RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 KCNH7Q9NS40 1196 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 RASAL2Q9UJF2 1139 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 TLL2Q9Y6L7 1015 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 ZSCAN5CA6NGD5 496 aaPredicted RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 TXNL1O43396 289 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 RAD51CO43502 376 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 NR3C2P08235 984 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 GSK3AP49840 483 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 KLK7P49862 253 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CCNG1P51959 295 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 MAGOHP61326 146 aaKnown RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CCNA1P78396 465 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SP4Q02446 784 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 GHRHRQ02643 423 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 RFX8Q6ZV50 586 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 PIGWQ7Z7B1 504 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CROCCP2Q86T23 111 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 HOOK3Q86VS8 718 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 LINC00469Q8N7U9 141 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SNX29Q8TEQ0 813 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 MAGOHBQ96A72 148 aaKnown RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 PBKQ96KB5 322 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CDC6Q99741 560 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 ZPBPQ9BS86 351 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF577Q9BSK1 485 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM121BQ9BXQ6 578 aaPredicted RBP9.79□□□□□ -0.84
SNHG3-201ENST00000413987 CUEDC2Q9H467 287 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 VTA1Q9NP79 307 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 NPHS2Q9NP85 383 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 RGL1Q9NZL6 768 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM59LQ9UK28 342 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 VPS28Q9UK41 221 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 SLC13A4Q9UKG4 626 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
SNHG3-201ENST00000413987 DOCK5Q9H7D0 1870 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 EME2A4GXA9 379 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 ABLIM1O14639 778 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF254O75437 659 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 MED24O75448 989 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TOMM70O94826 608 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 PLEKP08567 350 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 SLC10A3P09131 477 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 NQO1P15559 274 aaKnown RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 ALOX12P18054 663 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 ALAS2P22557 587 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 GSTT1P30711 240 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 MIIPQ5JXC2 388 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM63BQ5T3F8 832 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 SLC30A9Q6PML9 568 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 INTS8Q75QN2 995 aaKnown RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 AGAP11Q8TF27 550 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 UBLCP1Q8WVY7 318 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 IFT74Q96LB3 600 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 RUNDC3BQ96NL0 473 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 INPP4AQ96PE3 977 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 MXRA8Q9BRK3 442 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM120AQ9BXJ8 343 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 SEMA4AQ9H3S1 761 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 MROH8Q9H579 483 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 CNOT8Q9UFF9 292 aaKnown RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms