RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	OAS1	P00973	400 aa	Known RBP	13.79	□□□□□ -0.2
SF1-206	ENST00000413725	LTF	P02788	710 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	GLI1	P08151	1106 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	BMP1	P13497	986 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	RARG	P13631	454 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	HDC	P19113	662 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	SCNN1A	P37088	669 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	SLC6A3	Q01959	620 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	EFHC1	Q5JVL4	640 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	BSPRY	Q5W0U4	402 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	MTSS1L	Q765P7	747 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	BHLHA9	Q7RTU4	235 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	XYLT1	Q86Y38	959 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	ZDHHC14	Q8IZN3	488 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	CMTM8	Q8IZV2	173 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	ZNF276	Q8N554	614 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	OLIG1	Q8TAK6	271 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	RNF139	Q8WU17	664 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	SMARCD2	Q92925	531 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	VCPIP1	Q96JH7	1222 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	ASB16	Q96NS5	453 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	SLC46A2	Q9BY10	475 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	CCSER2	Q9H7U1	834 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	ABCC13	Q9NSE7	274 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	OLA1	Q9NTK5	396 aa	Known RBP	13.79	□□□□□ -0.2
SF1-206	ENST00000413725	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SF1-206	ENST00000413725	ASNSD1	Q9NWL6	643 aa		13.79	□□□□□ -0.2
SF1-206	ENST00000413725	DPYSL4	O14531	572 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	CAPN9	O14815	690 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	HSF2BP	O75031	334 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	MBL2	P11226	248 aa	Predicted RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	WEE1	P30291	646 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ATP5C1	P36542	298 aa	Known RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ZP2	Q05996	745 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ZNF268	Q14587	947 aa	Predicted RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	SLC18A3	Q16572	532 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	TJAP1	Q5JTD0	557 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	FAM78A	Q5JUQ0	283 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	C10orf120	Q5SQS8	335 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	KLHDC10	Q6PID8	442 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	OLFML1	Q6UWY5	402 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	MON1B	Q7L1V2	547 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	SLC26A9	Q7LBE3	791 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	E2F7	Q96AV8	911 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	TRIM11	Q96F44	468 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ZSWIM3	Q96MP5	696 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	CHP1	Q99653	195 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.78	□□□□□ -0.2
SF1-206	ENST00000413725	KIF9	Q9HAQ2	790 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	POPDC2	Q9HBU9	364 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	ZFP14	Q9HCL3	533 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	OSER1	Q9NX31	292 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	TAS2R14	Q9NYV8	317 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	DNMT3L	Q9UJW3	386 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725	TICRR	Q7Z2Z1	1910 aa		13.78	□□□□□ -0.2
SF1-206	ENST00000413725		A0A087X0T9	212 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	LOC730098	B7Z3J9	87 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	GOLGA8S	H3BPF8	625 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	COCH	O43405	550 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	OLFM2	O95897	454 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	FTL	P02792	175 aa	Predicted RBP	13.77	□□□□□ -0.21
SF1-206	ENST00000413725	FAM228B	P0C875	321 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	PGF	P49763	221 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	GSC	P56915	257 aa	Predicted RBP	13.77	□□□□□ -0.21
SF1-206	ENST00000413725	YWHAZ	P63104	245 aa	Known RBP	13.77	□□□□□ -0.21
SF1-206	ENST00000413725	SLC7A9	P82251	487 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	PTP4A2	Q12974	167 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	C2CD6	Q53TS8	623 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	MIA3	Q5JRA6	1907 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	CCDC122	Q5T0U0	273 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	ALKBH5	Q6P6C2	394 aa	Known RBP	13.77	□□□□□ -0.21
SF1-206	ENST00000413725	HFE2	Q6ZVN8	426 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	BEND5	Q7L4P6	421 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SF1-206	ENST00000413725	TMTC1	Q8IUR5	882 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	MCOLN2	Q8IZK6	566 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	EDEM1	Q92611	657 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	NXPE3	Q969Y0	559 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	SLC22A12	Q96S37	553 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	CYP2S1	Q96SQ9	504 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	TRPV4	Q9HBA0	871 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	TDP1	Q9NUW8	608 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	ARHGAP26	Q9UNA1	814 aa		13.77	□□□□□ -0.21
SF1-206	ENST00000413725	DAB1	O75553	588 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	MYBL1	P10243	752 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	NCAM1	P13591	858 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	FECH	P22830	423 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	CYLC1	P35663	651 aa	Predicted RBP	13.76	□□□□□ -0.21
SF1-206	ENST00000413725	GFPT1	Q06210	699 aa	Predicted RBP	13.76	□□□□□ -0.21
SF1-206	ENST00000413725	EFEMP1	Q12805	493 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	MSANTD2	Q6P1R3	559 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	DNAJC24	Q6P3W2	148 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	CCDC170	Q8IYT3	715 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	CELF5	Q8N6W0	485 aa	Known RBP	13.76	□□□□□ -0.21
SF1-206	ENST00000413725	C3orf20	Q8ND61	904 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	ELSPBP1	Q96BH3	223 aa		13.76	□□□□□ -0.21
SF1-206	ENST00000413725	ZNF653	Q96CK0	615 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms