RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CD101Q93033 1021 aa15.57■□□□□ 0.08
LIMS4-201ENST00000413601 TUBGCP2Q9BSJ2 902 aa15.57■□□□□ 0.08
LIMS4-201ENST00000413601 ULBP1Q9BZM6 244 aa15.57■□□□□ 0.08
LIMS4-201ENST00000413601 LRRC4Q9HBW1 653 aa15.57■□□□□ 0.08
LIMS4-201ENST00000413601 CLIC5Q9NZA1 410 aa15.57■□□□□ 0.08
LIMS4-201ENST00000413601 CNTN6Q9UQ52 1028 aa15.57■□□□□ 0.08
LIMS4-201ENST00000413601 GTPBP10A4D1E9 387 aaKnown RBP15.56■□□□□ 0.08
LIMS4-201ENST00000413601 KCNJ18B7U540 433 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 M0QYV0 167 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 MBD3O95983 291 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 DRD1P21728 446 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 OPRD1P41143 372 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 CXCL12P48061 93 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 RGS7P49802 495 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 CCR3P51677 355 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 MFAP3P55082 362 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 YWHAGP61981 247 aaKnown RBP eCLIP15.56■□□□□ 0.08
LIMS4-201ENST00000413601 ADIGQ0VDE8 80 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 KCNJ12Q14500 433 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 STILQ15468 1287 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 ARHGAP44Q17R89 818 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 VWA3BQ502W6 1294 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 PM20D1Q6GTS8 502 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 PKN3Q6P5Z2 889 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 ENOSF1Q7L5Y1 443 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 MIB1Q86YT6 1006 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 ARHGAP18Q8N392 663 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 ZNF276Q8N554 614 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 SLC35F5Q8WV83 523 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 KCTD13Q8WZ19 329 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 SECISBP2LQ93073 1101 aaKnown RBP15.56■□□□□ 0.08
LIMS4-201ENST00000413601 EXOC4Q96A65 974 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 OTUB2Q96DC9 234 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 NDST4Q9H3R1 872 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 C2orf42Q9NWW7 574 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 APEX2Q9UBZ4 518 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 EML5Q05BV3 1969 aa15.56■□□□□ 0.08
LIMS4-201ENST00000413601 PIK3R2O00459 728 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 GREM1O60565 184 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 GFRA3O60609 400 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 RNF40O75150 1001 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 GABBR2O75899 941 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 ADH1CP00326 375 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 ADH5P11766 374 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 LCP1P13796 627 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 USP8P40818 1118 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 SLC6A11P48066 632 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 GOLGA8FQ08AF8 430 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 GOLGA8DPQ0D2H9 430 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 EFEMP1Q12805 493 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 LY6G5CQ5SRR4 150 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 PMF1Q6P1K2 205 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 ZC3H14Q6PJT7 736 aaKnown RBP15.55■□□□□ 0.08
LIMS4-201ENST00000413601 SASS6Q6UVJ0 657 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 BHLHA9Q7RTU4 235 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 ASCL5Q7RTU5 278 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 TADA2BQ86TJ2 420 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 SIX6OS1Q8N1H7 587 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 EZH1Q92800 747 aaPredicted RBP15.55■□□□□ 0.08
LIMS4-201ENST00000413601 NKD2Q969F2 451 aaPredicted RBP15.55■□□□□ 0.08
LIMS4-201ENST00000413601 SIX2Q9NPC8 291 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 ACP6Q9NPH0 428 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 RASAL2Q9UJF2 1139 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 AJAP1Q9UKB5 411 aaPredicted RBP15.55■□□□□ 0.08
LIMS4-201ENST00000413601 NFE2L3Q9Y4A8 694 aa15.55■□□□□ 0.08
LIMS4-201ENST00000413601 PRR23AA6NEV1 266 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 BECN2A8MW95 431 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 PES1O00541 588 aaKnown RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 LETM1O95202 739 aaPredicted RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 TDGF1P13385 188 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 HOXC13P31276 330 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 PPP2R5DQ14738 602 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 TCP11X2Q5H9J9 407 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 CCDC183Q5T5S1 534 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 BTBD8Q5XKL5 378 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 C11orf57Q6ZUT1 292 aaPredicted RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 RSRC2Q7L4I2 434 aaKnown RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 C12orf40Q86WS4 652 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 TMEM25Q86YD3 366 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 ENOX1Q8TC92 643 aaKnown RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 ZNF606Q8WXB4 792 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 NELL1Q92832 810 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 FAM81BQ96LP2 452 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 CDK5RAP1Q96SZ6 601 aaKnown RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 SPHK2Q9NRA0 654 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 ZSCAN32Q9NX65 697 aa15.54■□□□□ 0.08
LIMS4-201ENST00000413601 LSM7Q9UK45 103 aaKnown RBP15.54■□□□□ 0.08
LIMS4-201ENST00000413601 MYO18AQ92614 2054 aaKnown RBP15.53■□□□□ 0.08
LIMS4-201ENST00000413601 YJEFN3A6XGL0 299 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 E7ENQ6 273 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 THAP12O43422 761 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 STC2O76061 302 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 HMBSP08397 361 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 GNA15P30679 374 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 DAOAP59103 153 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 GAD2Q05329 585 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 MESP2Q0VG99 397 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 ANO4Q32M45 955 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 BSPRYQ5W0U4 402 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms