RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 HOXC11O43248 304 aaPredicted RBP20.3■□□□□ 0.84
CPSF7-204ENST00000413232 TULP3O75386 442 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 CAVIN2O95810 425 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 TNFRSF4P43489 277 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 CYFIP2Q96F07 1278 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 P2RY11Q96G91 374 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 DUSP9Q99956 384 aaKnown RBP20.3■□□□□ 0.84
CPSF7-204ENST00000413232 FBXO44Q9H4M3 255 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 MMRN2Q9H8L6 949 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 GDPD2Q9HCC8 539 aa20.3■□□□□ 0.84
CPSF7-204ENST00000413232 PATE3B3GLJ2 98 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 MDM4O15151 490 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 FAM200BP0CF97 657 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 ANO4Q32M45 955 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 ZCWPW2Q504Y3 356 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 N4BP2L1Q5TBK1 243 aaPredicted RBP20.29■□□□□ 0.84
CPSF7-204ENST00000413232 HTR3DQ70Z44 454 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 MIB1Q86YT6 1006 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 FAM186BQ8IYM0 893 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
CPSF7-204ENST00000413232 GUF1Q8N442 669 aaKnown RBP20.29■□□□□ 0.84
CPSF7-204ENST00000413232 SEMA4DQ92854 862 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 CYLDQ9NQC7 956 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 TLR8Q9NR97 1041 aaKnown RBP20.29■□□□□ 0.84
CPSF7-204ENST00000413232 MBD1Q9UIS9 605 aaPredicted RBP20.29■□□□□ 0.84
CPSF7-204ENST00000413232 SCML2Q9UQR0 700 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 PCNX2A6NKB5 2137 aa20.29■□□□□ 0.84
CPSF7-204ENST00000413232 TBC1D3BA6NDS4 549 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 CILPO75339 1184 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 ZNF202O95125 648 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 CD58P19256 250 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 ACO1P21399 889 aaKnown RBP20.28■□□□□ 0.84
CPSF7-204ENST00000413232 P2RY2P41231 377 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 MCCD1P59942 119 aaPredicted RBP20.28■□□□□ 0.84
CPSF7-204ENST00000413232 ADAM9Q13443 819 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 RNF43Q68DV7 783 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 INTS8Q75QN2 995 aaKnown RBP20.28■□□□□ 0.84
CPSF7-204ENST00000413232 LSM14BQ9BX40 385 aaKnown RBP20.28■□□□□ 0.84
CPSF7-204ENST00000413232 NT5C1AQ9BXI3 368 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 NACA2Q9H009 215 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 CYP3A43Q9HB55 503 aa20.28■□□□□ 0.84
CPSF7-204ENST00000413232 A0A1W2PQ27 194 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 A0A1W2PQ64 194 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 A0A1W2PQD8 194 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 A0A1W2PQH9 124 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 LNP1A1A4G5 178 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.27■□□□□ 0.84
CPSF7-204ENST00000413232 HSF5Q4G112 596 aaPredicted RBP20.27■□□□□ 0.84
CPSF7-204ENST00000413232 EOGTQ5NDL2 527 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 PPP1R26Q5T8A7 1209 aaPredicted RBP20.27■□□□□ 0.84
CPSF7-204ENST00000413232 SCD5Q86SK9 330 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 TERB1Q8NA31 727 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 HMGB4Q8WW32 186 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 DDX1Q92499 740 aaKnown RBP20.27■□□□□ 0.84
CPSF7-204ENST00000413232 EDEM2Q9BV94 578 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 NIF3L1Q9GZT8 377 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 DEC1Q9P2X7 70 aa20.27■□□□□ 0.84
CPSF7-204ENST00000413232 C4orf47A7E2U8 309 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 PSMC2P35998 433 aaKnown RBP20.26■□□□□ 0.83
CPSF7-204ENST00000413232 ATP5C1P36542 298 aaKnown RBP20.26■□□□□ 0.83
CPSF7-204ENST00000413232 WASP42768 502 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 DHPSP49366 369 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-204ENST00000413232 KIF11P52732 1056 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 MAP7D1Q3KQU3 841 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 ZNF394Q53GI3 561 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 BTBD8Q5XKL5 378 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 TPGS1Q6ZTW0 290 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 TOGARAM2Q6ZUX3 1019 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 ZNF513Q8N8E2 541 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-204ENST00000413232 ACOX2Q99424 681 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 TMEM8AQ9HCN3 771 aa20.26■□□□□ 0.83
CPSF7-204ENST00000413232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.26■□□□□ 0.83
CPSF7-204ENST00000413232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 TCRBV21S2A2A0A5A6 115 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 ALDH1A2O94788 518 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 KIF20AO95235 890 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 RARGP13631 454 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 KRT13P13646 458 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 PTGER3P43115 390 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 IRX4P78413 519 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 C10orf76Q5T2E6 689 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 EGFLAMQ63HQ2 1017 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 TMEFF1Q8IYR6 380 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 TATDN2Q93075 761 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 CCDC47Q96A33 483 aaKnown RBP20.25■□□□□ 0.83
CPSF7-204ENST00000413232 ERLEC1Q96DZ1 483 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 ARID3AQ99856 593 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 DUSP16Q9BY84 665 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 IMPG2Q9BZV3 1241 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 POLMQ9NP87 494 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-204ENST00000413232 TMEM74BQ9NUR3 256 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 CIZ1Q9ULV3 898 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-204ENST00000413232 USP3Q9Y6I4 520 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 FRYQ5TBA9 3013 aa20.25■□□□□ 0.83
CPSF7-204ENST00000413232 CACNA1EQ15878 2313 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 PRRT4C9JH25 899 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 NEDD8-MDP1E9PL57 170 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 CDX4O14627 284 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-204ENST00000413232 GIPC1O14908 333 aa20.24■□□□□ 0.83
CPSF7-204ENST00000413232 KRT37O76014 449 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms