RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 GOLGA6L10A0A0M3HER8 536 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 FAM92AA1XBS5 289 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 LRRD1A4D1F6 860 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 C3orf70A6NLC5 250 aaPredicted RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 C5orf67F2Z3F1 127 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 PI4K2BG5E9Z4 385 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 CAPN9O14815 690 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 MDM4O15151 490 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 PRPSAP2O60256 369 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 LILRB3O75022 631 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ENDOD1O94919 500 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ABLIM3O94929 683 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ARHGEF15O94989 841 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RTN3O95197 1032 aaPredicted RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 ZRANB2O95218 330 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS41-204ENST00000413141 SEC24AO95486 1093 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RARAP10276 462 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 NCAM1P13591 858 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ATF2P15336 505 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 PTPN7P35236 360 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RDXP35241 583 aaKnown RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 BMPR1AP36894 532 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ATXN1P54253 815 aaKnown RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 COPS2P61201 443 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 YWHAGP61981 247 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS41-204ENST00000413141 USP46P62068 366 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RPL10AP62906 217 aaKnown RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 PITX1P78337 314 aaPredicted RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 DUSP4Q13115 394 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RAB33AQ14088 237 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SMC1AQ14683 1233 aaKnown RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 ELF2Q15723 593 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 PPP2R5EQ16537 467 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 LONRF2Q1L5Z9 754 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ATP13A4Q4VNC1 1196 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 KCNT1Q5JUK3 1230 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SYPL2Q5VXT5 272 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 BSPRYQ5W0U4 402 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 TPGS2Q68CL5 300 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 DENND5BQ6ZUT9 1274 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ANKS1BQ7Z6G8 1248 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SCD5Q86SK9 330 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 TAC4Q86UU9 113 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SLC13A5Q86YT5 568 aaPredicted RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 CCDC50Q8IVM0 306 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 NUP93Q8N1F7 819 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 MMGT1Q8N4V1 131 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 ZNF461Q8TAF7 563 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SLC7A14Q8TBB6 771 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 TEKT4Q8WW24 435 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RAPGEF5Q92565 580 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 EDEM1Q92611 657 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 PGAP3Q96FM1 320 aaPredicted RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 CEP295NLQ96MC4 621 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SLITRK1Q96PX8 696 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 HERPUD2Q9BSE4 406 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 C17orf80Q9BSJ5 609 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SNRNP25Q9BV90 132 aaKnown RBP6.94□□□□□ -1.3
VPS41-204ENST00000413141 AP1M1Q9BXS5 423 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 FBXO44Q9H4M3 255 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 PIGVQ9NUD9 493 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS41-204ENST00000413141 RRN3Q9NYV6 651 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 IL37Q9NZH6 218 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 GMIPQ9P107 970 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SCML2Q9UQR0 700 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 LZTS1Q9Y250 596 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 SSX2IPQ9Y2D8 614 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 YIPF1Q9Y548 306 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 NR2E3Q9Y5X4 410 aa6.94□□□□□ -1.3
VPS41-204ENST00000413141 GREB1Q4ZG55 1949 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 A0A1W2PQH9 124 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 TCRBV7S2A1N4TA0A589 114 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SLC38A8A6NNN8 435 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 GRXCR1A8MXD5 290 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CCDC188H7C350 402 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 M0QYT0 321 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 KRIT1O00522 736 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 FSCN2O14926 492 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 TEX28O15482 410 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 IGLV3-25P01717 112 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CA3P07451 260 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CNPP09543 421 aaKnown RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 RALAP11233 206 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 MYOGP15173 224 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 KDELR1P24390 212 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 YWHAQP27348 245 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CA8P35219 290 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CDKN2BP42772 138 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 TUFMP49411 452 aaKnown RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 PGFP49763 221 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ARSEP51690 589 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 TUBB4BP68371 445 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 DEUP1Q05D60 604 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 MTMR3Q13615 1198 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms