RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 RAB6CQ53S08 254 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 PLEKHG4Q58EX7 1191 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 ARFGAP2Q8N6H7 521 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 RNF157Q96PX1 679 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 CAPS2Q9BXY5 557 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 PHACTR1Q9C0D0 580 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 RAB6CQ9H0N0 254 aa20.12■□□□□ 0.81
LMO2-203ENST00000411482 CDC42EP4Q9H3Q1 356 aaKnown RBP20.12■□□□□ 0.81
LMO2-203ENST00000411482 TPX2Q9ULW0 747 aaKnown RBP20.12■□□□□ 0.81
LMO2-203ENST00000411482 MICAL3Q7RTP6 2002 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 SRRM3A6NNA2 597 aaPredicted RBP20.11■□□□□ 0.81
LMO2-203ENST00000411482 NPR3P17342 541 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 IRAK1P51617 712 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 CDH6P55285 790 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 IFFO1Q0D2I5 559 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 MORF4L2Q15014 288 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 P3H1Q32P28 736 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 C6orf118Q5T5N4 469 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 KIAA0319Q5VV43 1072 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 STRADAQ7RTN6 431 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 BNIPLQ7Z465 357 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 ZNF598Q86UK7 904 aaKnown RBP20.11■□□□□ 0.81
LMO2-203ENST00000411482 PIGZQ86VD9 579 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 DBF4BQ8NFT6 615 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 HSPH1Q92598 858 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 LPPQ93052 612 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 NT5C3BQ969T7 300 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 PGBD4Q96DM1 585 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 LRRC4CQ9HCJ2 640 aa20.11■□□□□ 0.81
LMO2-203ENST00000411482 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.11■□□□□ 0.81
LMO2-203ENST00000411482 PTPRSQ13332 1948 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 ATP2C2O75185 946 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 FGBP02675 491 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 CYP11A1P05108 521 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 GHRP10912 638 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 SCNN1GP51170 649 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 CLCNKBP51801 687 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 SLC8A3P57103 927 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 ADCY1Q08828 1119 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 CBLBQ13191 982 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 NOMO1Q15155 1222 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 RNASEH2BQ5TBB1 312 aaKnown RBP20.1■□□□□ 0.81
LMO2-203ENST00000411482 SLC9A4Q6AI14 798 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 RFX6Q8HWS3 928 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 HERVK_113Q902F9 699 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 ZNF670Q9BS34 389 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 PCDH18Q9HCL0 1135 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 CRTAC1Q9NQ79 661 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 CXXC1Q9P0U4 656 aaPredicted RBP20.1■□□□□ 0.81
LMO2-203ENST00000411482 SHOC2Q9UQ13 582 aa20.1■□□□□ 0.81
LMO2-203ENST00000411482 SMAPO00193 183 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 STIP1P31948 543 aaKnown RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 MATKP42679 507 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 ATP11AP98196 1134 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 DPYSL2Q16555 572 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 UBAP2Q5T6F2 1119 aaKnown RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 CLEC20AQ6ZU45 233 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 OTOP2Q7RTS6 562 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 PCGF5Q86SE9 256 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 PSTKQ8IV42 348 aaKnown RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 C3orf58Q8NDZ4 430 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 CLEC4CQ8WTT0 213 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 TMEM121Q9BTD3 319 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 SNRNP25Q9BV90 132 aaKnown RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 NGRNQ9NPE2 291 aaKnown RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 DDX43Q9NXZ2 648 aaKnown RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.09■□□□□ 0.81
LMO2-203ENST00000411482 SLC12A6Q9UHW9 1150 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 CDH9Q9ULB4 789 aa20.09■□□□□ 0.81
LMO2-203ENST00000411482 FARP1Q9Y4F1 1045 aaPredicted RBP20.09■□□□□ 0.81
LMO2-203ENST00000411482 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.08■□□□□ 0.81
LMO2-203ENST00000411482 ABHD2P08910 425 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 ZSCAN5DPP0CG00 497 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 TGM2P21980 687 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 VPS41P49754 854 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 MRPS5P82675 430 aaKnown RBP20.08■□□□□ 0.81
LMO2-203ENST00000411482 GRIK3Q13003 919 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 ERMARDQ5T6L9 678 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 CNKSR3Q6P9H4 555 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 PSRC1Q6PGN9 363 aaPredicted RBP20.08■□□□□ 0.81
LMO2-203ENST00000411482 PRUNE1Q86TP1 453 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 TDHQ8IZJ6 230 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 PQLC3Q8N755 202 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 HAUS1Q96CS2 278 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 UROC1Q96N76 676 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 ADAM2Q99965 735 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 SYT15Q9BQS2 421 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 CALN1Q9BXU9 219 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 ADAM33Q9BZ11 813 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 PRDM16Q9HAZ2 1276 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 NINJ2Q9NZG7 142 aa20.08■□□□□ 0.81
LMO2-203ENST00000411482 SAE1Q9UBE0 346 aaPredicted RBP20.08■□□□□ 0.81
LMO2-203ENST00000411482 M0QZQ0 153 aa20.07■□□□□ 0.8
LMO2-203ENST00000411482 DAB1O75553 588 aa20.07■□□□□ 0.8
LMO2-203ENST00000411482 FBXO21O94952 628 aa20.07■□□□□ 0.8
LMO2-203ENST00000411482 AGTP01019 485 aa20.07■□□□□ 0.8
LMO2-203ENST00000411482 LCP1P13796 627 aa20.07■□□□□ 0.8
LMO2-203ENST00000411482 PECAM1P16284 738 aaPredicted RBP20.07■□□□□ 0.8
LMO2-203ENST00000411482 EIF3EP60228 445 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms