RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 KDM4BO94953 1096 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 ATE1O95260 518 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 GJB6O95452 261 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF688P0C7X2 276 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 GNAT1P11488 350 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 JUPP14923 745 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 TCF4P15884 667 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 ELK1P19419 428 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 CD40P25942 277 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 PMELP40967 661 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 RFX2P48378 723 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 HERVK_113P62684 666 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 RAE1P78406 368 aaKnown RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 NTHL1P78549 312 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 KHDRBS1Q07666 443 aaKnown RBP eCLIP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 MTA1Q13330 715 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 IL11RAQ14626 422 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 DALRD3Q5D0E6 543 aaKnown RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 SLC10A5Q5PT55 438 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 SAXO2Q658L1 398 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 CCBE1Q6UXH8 406 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 TIFABQ6ZNK6 161 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 MED25Q71SY5 747 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 KRT27Q7Z3Y8 459 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 KCNK18Q7Z418 384 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 RTN4RL1Q86UN2 441 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 MARCH1Q8TCQ1 289 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 HCAR2Q8TDS4 363 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 MAP4K1Q92918 833 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 GLMNQ92990 594 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 USP13Q92995 863 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 PELI1Q96FA3 418 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 PRR11Q96HE9 360 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 F2RL3Q96RI0 385 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 UIMC1Q96RL1 719 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 OPRPNQ99935 248 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 RSPO3Q9BXY4 272 aaPredicted RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 CD244Q9BZW8 370 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 GBP3Q9H0R5 595 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 ARHGEF3Q9NR81 526 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 TLR8Q9NR97 1041 aaKnown RBP-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 IL17CQ9P0M4 197 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 USP35Q9P2H5 1018 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 PCDHA6Q9UN73 950 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 PCDHA12Q9UN75 941 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 U3KQA8 63 aa-1.22□□□□□ -2.6
RNU4-88P-201ENST00000411220 RTTNQ86VV8 2226 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 LRRK2Q5S007 2527 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 URB1O60287 2271 aaKnown RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 A0A1W2PPC1 479 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 EPOPA6NHQ4 379 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TMEM232C9JQI7 657 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 H0YIZ8 118 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 CBX4O00257 560 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 WWP2O00308 870 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 QSOX1O00391 747 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TCERG1O14776 1098 aaKnown RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 ARHGEF9O43307 516 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PPM1BO75688 479 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 RNF8O76064 485 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 KBTBD11O94819 623 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 WNT1P04628 370 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 UQCRFS1P1P0C7P4 283 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TRIM27P14373 513 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 CYP2C18P33260 490 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 SPRR2BP35325 72 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TIMP3P35625 211 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRMT2P55345 433 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 EEFSECP57772 596 aaKnown RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 SRSF5Q13243 272 aaKnown RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 EBI3Q14213 229 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 ADRM1Q16186 407 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PCID2Q5JVF3 399 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGFL1Q6UW32 110 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 C6orf15Q6UXA7 325 aaPredicted RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PLPPR4Q7Z2D5 763 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 HPS6Q86YV9 775 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 FAM71AQ8IYT1 594 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRR26Q8N8Z3 221 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 CCDC71LQ8N9Z2 235 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 B3GALNT2Q8NCR0 500 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC17A8Q8NDX2 589 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 IL31RAQ8NI17 732 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 SPATA20Q8TB22 786 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TBC1D16Q8TBP0 767 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PEX13Q92968 403 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 LRRC58Q96CX6 371 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 DYDC2Q96IM9 177 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 B3GALT6Q96L58 329 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 IWS1Q96ST2 819 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 SORT1Q99523 831 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 MACROD1Q9BQ69 325 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 LZTS2Q9BRK4 669 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TRIM51Q9BSJ1 452 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF577Q9BSK1 485 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 MXD3Q9BW11 206 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 POLR3BQ9NW08 1133 aaPredicted RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 EHD3Q9NZN3 535 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 NPAP1Q9NZP6 1156 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 DNAI1Q9UI46 699 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms