RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 PRRT4C9JH25 899 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 NEDD8-MDP1E9PL57 170 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 GFRA2O00451 464 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 GABRDO14764 452 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TRIM66O15016 1216 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 SLC28A2O43868 658 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 PCDHGA12O60330 932 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 SCP2P22307 547 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 IL12RB1P42701 662 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TPMTP51580 245 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 SLC12A3P55017 1021 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TFAMQ00059 246 aaKnown RBP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 IL9RQ01113 521 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 RHDQ02161 417 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 CYP27A1Q02318 531 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 IFRD2Q12894 506 aaPredicted RBP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TAF10Q12962 218 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TARDBPQ13148 414 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 LY6DQ14210 128 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 STARD3Q14849 445 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 FUT11Q495W5 492 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 NT5DC4Q86YG4 428 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TOP6BLQ8N6T0 577 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 WBP1Q96G27 269 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 TMEM176AQ96HP8 235 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 SLITRK1Q96PX8 696 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 XPO6Q96QU8 1125 aaKnown RBP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 ITM2CQ9NQX7 267 aa11.23□□□□□ -0.61
CCDC148-203ENST00000409889 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
CCDC148-203ENST00000409889 F8VP50 259 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
CCDC148-203ENST00000409889 KCNK3O14649 394 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 COCHO43405 550 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 EPB41L2O43491 1005 aaKnown RBP11.22□□□□□ -0.61
CCDC148-203ENST00000409889 CACNG3O60359 315 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 BRINP1O60477 761 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 PLXNA2O75051 1894 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 RFPL3O75679 317 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 IL18RAPO95256 599 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 IRF1P10914 325 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 C6P13671 934 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 OXTRP30559 389 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 TEAD4Q15561 434 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 ME3Q16798 604 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 SOWAHAQ2M3V2 549 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 HES3Q5TGS1 186 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 TDRD10Q5VZ19 366 aaKnown RBP11.22□□□□□ -0.61
CCDC148-203ENST00000409889 LAYNQ6UX15 382 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
CCDC148-203ENST00000409889 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 MYCT1Q8N699 235 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 IGSF8Q969P0 613 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 LGMNQ99538 433 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 PLIN2Q99541 437 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 REEP2Q9BRK0 252 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 CRTAC1Q9NQ79 661 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 GDAP2Q9NXN4 497 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 ODF2LQ9ULJ1 636 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 ANKRD6Q9Y2G4 727 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 PCDHGA1Q9Y5H4 931 aa11.22□□□□□ -0.61
CCDC148-203ENST00000409889 FLNCQ14315 2725 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 H0Y8X5 98 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 CBX4O00257 560 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 ENC1O14682 589 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 KRT19P08727 400 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 PLA2G4BP0C869 781 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 TYRP14679 529 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 PLCG1P19174 1290 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 LMO2P25791 158 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 ACTN2P35609 894 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 GRIA4P48058 902 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 WNT7BP56706 349 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 TMPRSS3P57727 454 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 POU5F1Q01860 360 aaKnown RBP11.21□□□□□ -0.61
CCDC148-203ENST00000409889 DNAJC3Q13217 504 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 ANKRD1Q15327 319 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 MAPRE1Q15691 268 aaKnown RBP11.21□□□□□ -0.61
CCDC148-203ENST00000409889 IL17AQ16552 155 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 HYIQ5T013 277 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 USP49Q70CQ1 688 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 ERICH1Q86X53 443 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
CCDC148-203ENST00000409889 WBP2Q969T9 261 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 SIPA1Q96FS4 1042 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 PCED1BQ96HM7 432 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 DUSP9Q99956 384 aaKnown RBP11.21□□□□□ -0.61
CCDC148-203ENST00000409889 NUP58Q9BVL2 599 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 BBS2Q9BXC9 721 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 TRIM9Q9C026 710 aa11.21□□□□□ -0.61
CCDC148-203ENST00000409889 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.61
CCDC148-203ENST00000409889 CDH9Q9ULB4 789 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms