RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TEKT4Q8WW24 435 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 RAPGEF5Q92565 580 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 C18orf25Q96B23 403 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 HSFY1Q96LI6 401 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 SNX25Q9H3E2 840 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 CNOT10Q9H9A5 744 aaKnown RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 ANAPC5Q9UJX4 755 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 USP18Q9UMW8 372 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 ZNF148Q9UQR1 794 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 R3HDM2Q9Y2K5 976 aaKnown RBP7.84□□□□□ -1.15
CXCR4-202ENST00000409817 HES2Q9Y543 173 aa7.84□□□□□ -1.15
CXCR4-202ENST00000409817 TRIP12Q14669 1992 aaPredicted RBP7.84□□□□□ -1.16
CXCR4-202ENST00000409817 E5RJQ4 531 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PI4K2BG5E9Z4 385 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 APOC4-APOC2K7ER74 178 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 RIPK2O43353 540 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ENDOD1O94919 500 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TRUB2O95900 331 aaKnown RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 APOC2P02655 101 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TCF4P15884 667 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PDGFRAP16234 1089 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 AKAP5P24588 427 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 MIPP30301 263 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 GPC1P35052 558 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PTPN9P43378 593 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PSMC4P43686 418 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 RAB27AP51159 221 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ITGA8P53708 1063 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SLC8A3P57103 927 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ZNF200P98182 395 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ORC1Q13415 861 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TFDP2Q14188 446 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 OASLQ15646 514 aaKnown RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ATP13A4Q4VNC1 1196 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 FAM47CQ5HY64 1035 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 GLRA4Q5JXX5 417 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 KAZNQ674X7 775 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TMEM214Q6NUQ4 689 aaKnown RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 OLFML1Q6UWY5 402 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 FAM183BPQ6ZVS7 135 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ACOT1Q86TX2 421 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SERINC5Q86VE9 423 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ARFGAP1Q8N6T3 406 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TRPV1Q8NER1 839 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SPATA18Q8TC71 538 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TRIB2Q92519 343 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 APOL6Q9BWW8 343 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 EPB41L4BQ9H329 900 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PCDH9Q9HC56 1237 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TJP2Q9UDY2 1190 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 DNALI1O14645 258 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PPEF2O14830 753 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 MDM4O15151 490 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TP73O15350 636 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 EIF3HO15372 352 aaKnown RBP eCLIP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SPINT1O43278 529 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PRPSAP2O60256 369 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TCEA3O75764 348 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 CABYRO75952 493 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TOMM70O94826 608 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 AGTP01019 485 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 KRT10P13645 584 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 IL1R2P27930 398 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ATP5DP30049 168 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SDC4P31431 198 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 RPL9P32969 192 aaKnown RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 FLT3LGP49771 235 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 RNF144AP50876 292 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 IRAK1P51617 712 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 LILRA4P59901 499 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PRR20EP86478 221 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PRR20CP86479 221 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PRR20DP86480 221 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PRR20BP86481 221 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PRR20AP86496 221 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SLC29A2Q14542 456 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 MORF4L2Q15014 288 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ZSCAN26Q16670 478 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 C1orf53Q5VUE5 145 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 IZUMO3Q5VZ72 239 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 MFSD5Q6N075 450 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 HIBCHQ6NVY1 386 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PMF1Q6P1K2 205 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 SLC26A9Q7LBE3 791 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ANKS1BQ7Z6G8 1248 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TTC30AQ86WT1 665 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 TMEM86AQ8N2M4 240 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 ZCCHC9Q8N567 271 aaKnown RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 EMC1Q8N766 993 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 C12orf29Q8N999 325 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PCSK9Q8NBP7 692 aaKnown RBP7.83□□□□□ -1.16
CXCR4-202ENST00000409817 KBTBD7Q8WVZ9 684 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 RXFP2Q8WXD0 754 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 IFT43Q96FT9 208 aa7.83□□□□□ -1.16
CXCR4-202ENST00000409817 PPP1R10Q96QC0 940 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms