RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MLLT6P55198 1093 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 PRKCQQ04759 706 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 PDGFRLQ15198 375 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 BSPRYQ5W0U4 402 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 ZNF677Q86XU0 584 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 RNF214Q8ND24 703 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 PDCL3Q9H2J4 239 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 MFSD1Q9H3U5 465 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 HEBP1Q9NRV9 189 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 DUS2Q9NX74 493 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 NOCTQ9UK39 431 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 NUDT5Q9UKK9 219 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 MYO6Q9UM54 1294 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 MYO16Q9Y6X6 1858 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 E5RJQ4 531 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 PDGFBP01127 241 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 GLULP15104 373 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 STARD6P59095 220 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 TNK2Q07912 1038 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 TAF3Q5VWG9 929 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 BTBD8Q5XKL5 378 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 RSRC2Q7L4I2 434 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 C1orf131Q8NDD1 294 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 PPP1R13BQ96KQ4 1090 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 LRFN3Q9BTN0 628 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 KLF16Q9BXK1 252 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 MIS12Q9H081 205 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 GTSE1Q9NYZ3 720 aa20.81■□□□□ 0.92
PDLIM2-207ENST00000409417 E2F8A0AVK6 867 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 LSM8O95777 96 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 CDH5P33151 784 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 SNX16P57768 344 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 FBXL6Q8N531 539 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 TMEM35BQ8NCS4 154 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 CLEC4CQ8WTT0 213 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 BAP1Q92560 729 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 GOLGA1Q92805 767 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 CPXM1Q96SM3 734 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 DDX23Q9BUQ8 820 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 EBF3Q9H4W6 596 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 TBC1D17Q9HA65 648 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 HPS4Q9NQG7 708 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 ABCC13Q9NSE7 274 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 OLA1Q9NTK5 396 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 IFNKQ9P0W0 207 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 WNT6Q9Y6F9 365 aa20.8■□□□□ 0.92
PDLIM2-207ENST00000409417 SLC9A3R1O14745 358 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 MDM4O15151 490 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 PAPSS1O43252 624 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 LTFP02788 710 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 MMEP08473 750 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 CCDC172P0C7W6 258 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 PBX1P40424 430 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 CDR2Q01850 454 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 GOLGA8FQ08AF8 430 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 GOLGA8DPQ0D2H9 430 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 EFEMP1Q12805 493 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 EML3Q32P44 896 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 ITPRIPL2Q3MIP1 535 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 TRIM68Q6AZZ1 485 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 TPRG1Q6ZUI0 275 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 FMNL3Q8IVF7 1028 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 SLC20A1Q8WUM9 679 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 ATP2A3Q93084 1043 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 EDEM3Q9BZQ6 932 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 LINC00597Q9H2U6 94 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 C8orf33Q9H7E9 229 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 MARCH2Q9P0N8 246 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 TBC1D14Q9P2M4 693 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 PIAS3Q9Y6X2 628 aa20.79■□□□□ 0.92
PDLIM2-207ENST00000409417 TPM3P06753 285 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 ARSAP15289 507 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 IFNAR2P48551 515 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 KPNA1P52294 538 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 COG7P83436 770 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 ARID5AQ03989 594 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 RUNX3Q13761 415 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 FIGNQ5HY92 759 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 MIB1Q86YT6 1006 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 FLCNQ8NFG4 579 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 RNF139Q8WU17 664 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 EDEM1Q92611 657 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 TTYH3Q9C0H2 523 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 STRIP2Q9ULQ0 834 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 SH3BP1Q9Y3L3 701 aa20.78■□□□□ 0.92
PDLIM2-207ENST00000409417 OTOL1A6NHN0 477 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 MAN2B1O00754 1011 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 FERP16591 822 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 PTPN20Q4JDL3 420 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 C1orf228Q6PIY5 440 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 ZNF852Q6ZMS4 543 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 HTR3DQ70Z44 454 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 SUGP1Q8IWZ8 645 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 MSANTD3Q96H12 275 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 TRIM62Q9BVG3 475 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 NUP58Q9BVL2 599 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 SYNCQ9H7C4 482 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 TJP2Q9UDY2 1190 aa20.77■□□□□ 0.92
PDLIM2-207ENST00000409417 KIF26AQ9ULI4 1882 aaPredicted RBP20.77■□□□□ 0.91
PDLIM2-207ENST00000409417 HELZP42694 1942 aaKnown RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms