RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RAB6CQ53S08 254 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 BTBD8Q5XKL5 378 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 CES5AQ6NT32 575 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 RTL10Q7L3V2 364 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 DEFB106AQ8N104 65 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 MAB21L3Q8N8X9 362 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 CMASQ8NFW8 434 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 CTNNBL1Q8WYA6 563 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 NUP85Q9BW27 656 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 RAB6CQ9H0N0 254 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 SMG9Q9H0W8 520 aaKnown RBP14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 SLITRK6Q9H5Y7 841 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 TLR8Q9NR97 1041 aaKnown RBP14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 COX16Q9P0S2 106 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 UXTQ9UBK9 157 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 SFMBT1Q9UHJ3 866 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 CD207Q9UJ71 328 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 STRIP2Q9ULQ0 834 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 COG5Q9UP83 839 aa14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 MRPS23Q9Y3D9 190 aaKnown RBP14.77□□□□□ -0.04
CHRNA1-204ENST00000409323 NCANO14594 1321 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 GRXCR2A6NFK2 248 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 ESPNB1AK53 854 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 NCK2O43639 380 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 KRT3P12035 628 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 RARGP13631 454 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 HOXB8P17481 243 aaPredicted RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 RFC1P35251 1148 aaPredicted RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 SNX16P57768 344 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 OGDHQ02218 1023 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 DCAF6Q58WW2 860 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 PRSS36Q5K4E3 855 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 GPR158Q5T848 1215 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 DAB2IPQ5VWQ8 1189 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 RSRC2Q7L4I2 434 aaKnown RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 SLC26A9Q7LBE3 791 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 MON1AQ86VX9 555 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 C17orf53Q8N3J3 647 aaPredicted RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 ARL14EPQ8N8R7 260 aaPredicted RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 SMRP1Q8NCR6 262 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 C3orf20Q8ND61 904 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 ZSWIM3Q96MP5 696 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 CFAP57Q96MR6 1250 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 ADAM33Q9BZ11 813 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 POMKQ9H5K3 350 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 TRMT1Q9NXH9 659 aaKnown RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 CTTNBP2NLQ9P2B4 639 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 SALL4Q9UJQ4 1053 aa14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 USP15Q9Y4E8 981 aaPredicted RBP14.77□□□□□ -0.05
CHRNA1-204ENST00000409323 CLUHO75153 1309 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 TMEM110-MUSTN1A8MSY1 372 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 CAPN9O14815 690 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 SCAMP3O14828 347 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 MSI1O43347 362 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 BUB1O43683 1085 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 TLR5O60602 858 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 CYP1A2P05177 515 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 TMEM253P0C7T8 217 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 FSHRP23945 695 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 VAV2P52735 878 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 EPHA5P54756 1037 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 YWHAZP63104 245 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 ATP11AP98196 1134 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 EFEMP1Q12805 493 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 CDO1Q16878 200 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 C15orf59Q2T9L4 293 aaPredicted RBP14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 EFHC1Q5JVL4 640 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 ATAT1Q5SQI0 421 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 C10orf120Q5SQS8 335 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 SH3PXD2AQ5TCZ1 1133 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 PLEKHA7Q6IQ23 1121 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 DCUN1D2Q6PH85 259 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 CPNE8Q86YQ8 564 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 MIB1Q86YT6 1006 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 SLC35G2Q8TBE7 412 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 MRPS31Q92665 395 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 GOLGA1Q92805 767 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 HLA-CQ95604 372 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 VCPIP1Q96JH7 1222 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 CEP295NLQ96MC4 621 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 GCNAQ96QF7 691 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 RNF38Q9H0F5 515 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 PARVAQ9NVD7 372 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 COMMD8Q9NX08 183 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 SMPD4Q9NXE4 827 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 EHD2Q9NZN4 543 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 WDR35Q9P2L0 1181 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 RASAL2Q9UJF2 1139 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
CHRNA1-204ENST00000409323 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 MACROD2A1Z1Q3 448 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 USP27XA6NNY8 438 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 COCHO43405 550 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 HSF2BPO75031 334 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 HMBSP08397 361 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 ZDHHC11BP0C7U3 371 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 MYBL1P10243 752 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 CDC25CP30307 473 aa14.75□□□□□ -0.05
CHRNA1-204ENST00000409323 ATXN1P54253 815 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms