RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TRABD2BA6NFA1 517 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 CILPO75339 1184 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 PRPF6O94906 941 aaKnown RBP17.69■□□□□ 0.42
CHMP3-203ENST00000409225 CER1O95813 267 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 NCAM1P13591 858 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 DUOXA2Q1HG44 320 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 SCAMP5Q8TAC9 235 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 XPO6Q96QU8 1125 aaKnown RBP17.69■□□□□ 0.42
CHMP3-203ENST00000409225 GPR174Q9BXC1 333 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 BBS2Q9BXC9 721 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 B3GNT5Q9BYG0 378 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 TRIM9Q9C026 710 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 NACA2Q9H009 215 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 TOR4AQ9NXH8 423 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 FNDC3AQ9Y2H6 1198 aaKnown RBP17.69■□□□□ 0.42
CHMP3-203ENST00000409225 ASXL3Q9C0F0 2248 aa17.69■□□□□ 0.42
CHMP3-203ENST00000409225 BPTFQ12830 3046 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 WASH3PC4AMC7 463 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 TYRP14679 529 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 MATKP42679 507 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 BNC1Q01954 994 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 TPGS1Q6ZTW0 290 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 CBWD2Q8IUF1 395 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 BAHD1Q8TBE0 780 aaPredicted RBP17.68■□□□□ 0.42
CHMP3-203ENST00000409225 RHBDD1Q8TEB9 315 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 DNASE2BQ8WZ79 361 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 DNAJC19Q96DA6 116 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 EPSTI1Q96J88 318 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 KCNK16Q96T55 309 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 WSB2Q9NYS7 404 aaPredicted RBP17.68■□□□□ 0.42
CHMP3-203ENST00000409225 GMIPQ9P107 970 aa17.68■□□□□ 0.42
CHMP3-203ENST00000409225 FAM149AA5PLN7 773 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 CACNG3O60359 315 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CHMP3-203ENST00000409225 TACC1O75410 805 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 ZNF883P0CG24 379 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 IDEP14735 1019 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 C19orf57Q0VDD7 668 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 HLA-BQ31612 363 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 DCAF12L1Q5VU92 463 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 USP49Q70CQ1 688 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 SCUBE3Q8IX30 993 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 B3GALNT2Q8NCR0 500 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 DCBLD2Q96PD2 775 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 CDC6Q99741 560 aa17.67■□□□□ 0.42
CHMP3-203ENST00000409225 DUSP9Q99956 384 aaKnown RBP17.67■□□□□ 0.42
CHMP3-203ENST00000409225 ASH1LQ9NR48 2969 aaKnown RBP17.67■□□□□ 0.42
CHMP3-203ENST00000409225 A0A087WV48 116 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 ZNF233A6NK53 670 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 A8MXQ7 604 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 GFRA2O00451 464 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 BCAT2O15382 392 aaPredicted RBP17.66■□□□□ 0.42
CHMP3-203ENST00000409225 BMP15O95972 392 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 DGKGP49619 791 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 TUBP50607 506 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 SLC5A3P53794 718 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 TNNC1P63316 161 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 ALCAMQ13740 583 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 SURF1Q15526 300 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 FUT11Q495W5 492 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 CCDC157Q569K6 752 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 SNX30Q5VWJ9 437 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 IL27RAQ6UWB1 636 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 SV2BQ7L1I2 683 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 WDR49Q8IV35 697 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 GALNT15Q8N3T1 639 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 BHMTQ93088 406 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 UBL7Q96S82 380 aaPredicted RBP17.66■□□□□ 0.42
CHMP3-203ENST00000409225 MED10Q9BTT4 135 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 OLFML3Q9NRN5 406 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 WDR35Q9P2L0 1181 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 STK17AQ9UEE5 414 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 BTBD3Q9Y2F9 522 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 NFE2L3Q9Y4A8 694 aa17.66■□□□□ 0.42
CHMP3-203ENST00000409225 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 FLRT2O43155 660 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 GREM1O60565 184 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 DKK1O94907 266 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 CST3P01034 146 aaPredicted RBP17.65■□□□□ 0.42
CHMP3-203ENST00000409225 GJB2P29033 226 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 CAMK2BQ13554 666 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 STARD3Q14849 445 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 SF3A1Q15459 793 aaKnown RBP17.65■□□□□ 0.42
CHMP3-203ENST00000409225 WDR72Q3MJ13 1102 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 HTR3DQ70Z44 454 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 FAM35AQ86V20 835 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 CADM4Q8NFZ8 388 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 PIP4K2CQ8TBX8 421 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 USP36Q9P275 1121 aaKnown RBP17.65■□□□□ 0.42
CHMP3-203ENST00000409225 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 EIF2B4Q9UI10 523 aaKnown RBP17.65■□□□□ 0.42
CHMP3-203ENST00000409225 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHMP3-203ENST00000409225 STON1Q9Y6Q2 735 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 GOLGA4Q13439 2230 aaKnown RBP17.65■□□□□ 0.42
CHMP3-203ENST00000409225 ATP8B3O60423 1300 aa17.65■□□□□ 0.42
CHMP3-203ENST00000409225 A0A1B0GVT2 93 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 KIAA0391O15091 583 aaKnown RBP17.64■□□□□ 0.41
CHMP3-203ENST00000409225 TLR5O60602 858 aa17.64■□□□□ 0.41
CHMP3-203ENST00000409225 TBX18O95935 607 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms