RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 NECTIN3Q9NQS3 549 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PARVAQ9NVD7 372 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RBAKQ9NYW8 714 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 AGO2Q9UKV8 859 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 AGAP1Q9UPQ3 857 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 GIT1Q9Y2X7 761 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PCDHA10Q9Y5I2 948 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TMEM94Q12767 1356 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PLEKHG2Q9H7P9 1386 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 DNAJB2P25686 324 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RPA1P27694 616 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 USP10Q14694 798 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 PAGE2BQ5JRK9 111 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CAND1Q86VP6 1230 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 RIPOR3Q96MK2 946 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RHBGQ9H310 441 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PFASO15067 1338 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TSPAN9O75954 239 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 GLP2RO95838 553 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 LBPP18428 481 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 EIF2S3LQ2VIR3 472 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 PDCD4Q53EL6 469 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 FAXCQ5TGI0 409 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TAF8Q7Z7C8 310 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SLC16A10Q8TF71 515 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CNPY3Q9BT09 278 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TIPINQ9BVW5 301 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ADGRE3Q9BY15 652 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CLPBQ9H078 707 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 POLMQ9NP87 494 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 MRPS33Q9Y291 106 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 OR10H2O60403 315 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ATXN1P54253 815 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 RHOAP61586 193 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CLCA4Q14CN2 919 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CYP51A1Q16850 503 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 KIAA0319Q5VV43 1072 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SMYD3Q9H7B4 428 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TMEM165Q9HC07 324 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PDE11AQ9HCR9 933 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 MAPKBP1O60336 1514 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CACNB4O00305 520 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 PLD2O14939 933 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RFC5P40937 340 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SERPINB9P50453 376 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PLTPP55058 493 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CDH6P55285 790 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PDK1Q15118 436 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SETMARQ53H47 684 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 NUP93Q8N1F7 819 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 SAP130Q9H0E3 1048 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PCSK1NQ9UHG2 260 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TNPO3Q9Y5L0 923 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 SBNO1A3KN83 1393 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 HYKKA2RU49 373 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CSTBP04080 98 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 PDGFRBP09619 1106 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 AGXTP21549 392 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 NTSP30990 170 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 HSPA9P38646 679 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 EIF4A2Q14240 407 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 UBE3CQ15386 1083 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 NFIL3Q16649 462 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 UAP1L1Q3KQV9 507 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ZNF280DQ6N043 979 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 BRSK2Q8IWQ3 736 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TMEM159Q96B96 161 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RNPC3Q96LT9 517 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 MEIS3Q99687 375 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 MRPL17Q9NRX2 175 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 MOCS1Q9NZB8 636 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 XPR1Q9UBH6 696 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 AK5Q9Y6K8 562 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 AKAP12Q02952 1782 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 GPC5P78333 572 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ARF5P84085 180 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TRIP13Q15645 432 aaPredicted RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 NAPEPLDQ6IQ20 393 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 LIN54Q6MZP7 749 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 MRNIPQ6NTE8 343 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 MRPL50Q8N5N7 158 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 L3MBTL4Q8NA19 623 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ZNF563Q8TA94 476 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 KCNJ9Q92806 393 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CDYLQ9Y232 598 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 MSH4O15457 936 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ACAT1P24752 427 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 EPHX2P34913 555 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 MNDAP41218 407 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RGS1Q08116 209 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 ILF2Q12905 390 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 PTGES3Q15185 160 aaKnown RBP3.49□□□□□ -1.85
NEB-204ENST00000409198 SGCBQ16585 318 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 KBTBD12Q3ZCT8 623 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PDSS1Q5T2R2 415 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 RNF43Q68DV7 783 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 PYHIN1Q6K0P9 492 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 TTLL11Q8NHH1 800 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 CAPS2Q9BXY5 557 aa3.49□□□□□ -1.85
NEB-204ENST00000409198 WDCPQ9H6R7 721 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms