RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MIEF1Q9NQG6 463 aa12.51□□□□□ -0.41
SHANK2-203ENST00000409161 AKAP7Q9P0M2 348 aaPredicted RBP12.51□□□□□ -0.41
SHANK2-203ENST00000409161 ALG6Q9Y672 507 aa12.51□□□□□ -0.41
SHANK2-203ENST00000409161 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 UBE2QL1A1L167 161 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 CCDC162PA2VCL2 907 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ATG7O95352 703 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 HPCAL1P37235 193 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ERFP50548 548 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 GEMP55040 296 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 PCSK7Q16549 785 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 CHSY1Q86X52 802 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 LPAR1Q92633 364 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ZNF624Q9P2J8 865 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 CST8O60676 142 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 PSMB9P28065 219 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 GPR162Q16538 588 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ERAP2Q6P179 960 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 MACC1Q6ZN28 852 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ADHFE1Q8IWW8 467 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 IZUMO1Q8IYV9 350 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TMEM132CQ8N3T6 1108 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 CENPIQ92674 756 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 METP08581 1390 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TMEM2Q9UHN6 1383 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 LDLRP01130 860 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 AQP5P55064 265 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 SLC13A5Q86YT5 568 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ARHGEF19Q8IW93 802 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 WDR41Q9HAD4 459 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 PRKAA1Q13131 559 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 NAIF1Q69YI7 327 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 MYO1HQ8N1T3 1032 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TRPC4APQ8TEL6 797 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 L2HGDHQ9H9P8 463 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 NEK6Q9HC98 313 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 CNOT7Q9UIV1 285 aaKnown RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 NR3C2P08235 984 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 GPC1P35052 558 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 NR2C2P49116 596 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 NEK5Q6P3R8 708 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 GDPD5Q8WTR4 605 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 WDR12Q9GZL7 423 aaKnown RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TIMMDC1Q9NPL8 285 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 RNF146Q9NTX7 359 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 LNPEPQ9UIQ6 1025 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 DYNC1LI2O43237 492 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 VAC14Q08AM6 782 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 PDPK2PQ6A1A2 396 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 MTDHQ86UE4 582 aaKnown RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 LRRC34Q8IZ02 419 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TMEM120AQ9BXJ8 343 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TRPM5Q9NZQ8 1165 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ATP6V1HQ9UI12 483 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 KIAA1257Q9ULG3 409 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 AHCYL1O43865 530 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
SHANK2-203ENST00000409161 ZNF24P17028 368 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 TBCELQ5QJ74 424 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 HAVCR1Q96D42 359 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 CLPBQ9H078 707 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
SHANK2-203ENST00000409161 YWHAQP27348 245 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 CDK7P50613 346 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 SEC24CP53992 1094 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 NUAK2Q9H093 628 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 GALNT8Q9NY28 637 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 CORO2BQ9UQ03 480 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 GNG14A0A1W2PPG7 69 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 LCA5LO95447 670 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 CASP4P49662 377 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 GNA13Q14344 377 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 STX12Q86Y82 276 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 TC2NQ8N9U0 490 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 SH3BP1Q9Y3L3 701 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 ATXN2Q99700 1313 aaKnown RBP12.49□□□□□ -0.41
SHANK2-203ENST00000409161 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 TRIM48Q8IWZ4 208 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 DEFB107AQ8IZN7 70 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 SHOC2Q9UQ13 582 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 GUCY1B2O75343 617 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 ALOX5P09917 674 aa12.49□□□□□ -0.41
SHANK2-203ENST00000409161 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
SHANK2-203ENST00000409161 MCL1Q07820 350 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms