RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 FBXL20Q96IG2 436 aa3.16□□□□□ -1.9
CUL3-203ENST00000409096 MMRN2Q9H8L6 949 aa3.16□□□□□ -1.9
CUL3-203ENST00000409096 KCTD5Q9NXV2 234 aa3.16□□□□□ -1.9
CUL3-203ENST00000409096 KCND3Q9UK17 655 aa3.16□□□□□ -1.9
CUL3-203ENST00000409096 USP22Q9UPT9 525 aa3.16□□□□□ -1.9
CUL3-203ENST00000409096 PCDHB2Q9Y5E7 798 aa3.16□□□□□ -1.9
CUL3-203ENST00000409096 NCAM2O15394 837 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 PROM1O43490 865 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 SNX2O60749 519 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 KRT38O76015 456 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 KRTAP10-2P60368 255 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 ACOX1Q15067 660 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 CYP26C1Q6V0L0 522 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 CCDC117Q8IWD4 279 aaPredicted RBP3.15□□□□□ -1.9
CUL3-203ENST00000409096 SYNE4Q8N205 404 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 SLC22A17Q8WUG5 538 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 AFG1LQ8WV93 481 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 CTHRC1Q96CG8 243 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 ZDHHC12Q96GR4 267 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 CDK5RAP1Q96SZ6 601 aaKnown RBP3.15□□□□□ -1.9
CUL3-203ENST00000409096 HELLSQ9NRZ9 838 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 HERC5Q9UII4 1024 aaKnown RBP3.15□□□□□ -1.9
CUL3-203ENST00000409096 GTF2A1LQ9UNN4 478 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 LZTS1Q9Y250 596 aa3.15□□□□□ -1.9
CUL3-203ENST00000409096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.15□□□□□ -1.9
CUL3-203ENST00000409096 RRN3P2A6NIE6 340 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 NR2F6P10588 404 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 ENGP17813 658 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 ZEB1P37275 1124 aaPredicted RBP3.15□□□□□ -1.91
CUL3-203ENST00000409096 CCT5P48643 541 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 BFSP2Q13515 415 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 TRIM71Q2Q1W2 868 aaKnown RBP3.15□□□□□ -1.91
CUL3-203ENST00000409096 GALNTL6Q49A17 601 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 AASDHQ4L235 1098 aaPredicted RBP3.15□□□□□ -1.91
CUL3-203ENST00000409096 LRRC24Q50LG9 513 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 PRR16Q569H4 304 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 TMED8Q6PL24 325 aaPredicted RBP3.15□□□□□ -1.91
CUL3-203ENST00000409096 CPOQ8IVL8 374 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 SIMC1Q8NDZ2 872 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 DDX23Q9BUQ8 820 aaKnown RBP3.15□□□□□ -1.91
CUL3-203ENST00000409096 ARHGAP39Q9C0H5 1083 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 ELAC1Q9H777 363 aaKnown RBP3.15□□□□□ -1.91
CUL3-203ENST00000409096 ST3GAL5Q9UNP4 418 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 CNTN6Q9UQ52 1028 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 RCE1Q9Y256 329 aa3.15□□□□□ -1.91
CUL3-203ENST00000409096 H0Y3Z8 333 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 EYA2O00167 538 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 MGST3O14880 152 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 SLC16A3O15427 465 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 SH3BP5O60239 455 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 FAM155BO75949 473 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 WDR47O94967 919 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 HSD3B1P14060 373 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 ZFXP17010 805 aaPredicted RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 CST5P28325 142 aaPredicted RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 PTGS2P35354 604 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 PDE1AP54750 535 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 EIF4A1P60842 406 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 FOXI1Q12951 378 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 LSM12Q3MHD2 195 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 C16orf89Q6UX73 402 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 RFX8Q6ZV50 586 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 SYT13Q7L8C5 426 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 C2CD5Q86YS7 1000 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 HERC6Q8IVU3 1022 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 FTSJ3Q8IY81 847 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 LRRC71Q8N4P6 559 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 ZNF668Q96K58 619 aaPredicted RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 MACROD1Q9BQ69 325 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 KLC4Q9NSK0 619 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 CNOT11Q9UKZ1 510 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 CA14Q9ULX7 337 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 LINC00473A8K010 186 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 PMPCBO75439 489 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 TMEM225BP0DP42 221 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 RXRAP19793 462 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 ADD2P35612 726 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 ARL4CP56559 192 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 PSG6Q00889 435 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 RNASELQ05823 741 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 FSTL1Q12841 308 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 FOXE3Q13461 319 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 TTC22Q5TAA0 569 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 FAM90A2PQ658T7 463 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 KAZNQ674X7 775 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 LAIR1Q6GTX8 287 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 ARMC6Q6NXE6 501 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 Q6YL49 198 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 SYNE3Q6ZMZ3 975 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 PEG10Q86TG7 708 aaKnown RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 P3H2Q8IVL5 708 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 NRSN1Q8IZ57 195 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 BEND2Q8NDZ0 799 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 C3orf49Q96BT1 292 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 ZSCAN31Q96LW9 406 aaPredicted RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 LENG8Q96PV6 779 aaPredicted RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 TRAPPC9Q96Q05 1148 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 DPCDQ9BVM2 203 aaPredicted RBP3.14□□□□□ -1.91
CUL3-203ENST00000409096 BRD8Q9H0E9 1235 aa3.14□□□□□ -1.91
CUL3-203ENST00000409096 SAP30LQ9HAJ7 183 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms