RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 NNTQ13423 1086 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 PPIGQ13427 754 aaKnown RBP eCLIP10.23□□□□□ -0.775e-7■■■□□ 16.3
POLR1A-202ENST00000409024 TFDP2Q14188 446 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 SIX1Q15475 284 aaPredicted RBP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 CTXN3Q4LDR2 81 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 ZFYVE27Q5T4F4 411 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 FAM171A1Q5VUB5 890 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 EMBQ6PCB8 327 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 LRRTM3Q86VH5 581 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 CPNE8Q86YQ8 564 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 KLHL7Q8IXQ5 586 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 RNF168Q8IYW5 571 aaPredicted RBP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 ARHGAP18Q8N392 663 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 KCTD6Q8NC69 237 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 ATL2Q8NHH9 583 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 SPPL2BQ8TCT7 592 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 CCHCR1Q8TD31 782 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 HASPINQ8TF76 798 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 FAM172AQ8WUF8 416 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 PNKPQ96T60 521 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 NPY6RQ99463 290 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 TTPALQ9BTX7 342 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 FBXO44Q9H4M3 255 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 CWH43Q9H720 699 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 RCOR3Q9P2K3 495 aaPredicted RBP10.23□□□□□ -0.77
POLR1A-202ENST00000409024 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
POLR1A-202ENST00000409024 hCG_1818297A0A087WSY0 165 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 LRRD1A4D1F6 860 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 C3orf70A6NLC5 250 aaPredicted RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 LTFP02788 710 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ZFXP17010 805 aaPredicted RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 BDNFP23560 247 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ITGB8P26012 769 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 IL1R2P27930 398 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 RDXP35241 583 aaKnown RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 PPM1AP35813 382 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ARSEP51690 589 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 BEND6Q5SZJ8 279 aaPredicted RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ERMARDQ5T6L9 678 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 TRNP1Q6NT89 227 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 CCDC137Q6PK04 289 aaKnown RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 MFSD7Q6UXD7 560 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 BBS12Q6ZW61 710 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 FAM149B1Q96BN6 582 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 IGSF21Q96ID5 467 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 SPATA17Q96L03 361 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 CFAP57Q96MR6 1250 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF558Q96NG5 402 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ERP44Q9BS26 406 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ZNF670Q9BS34 389 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 GPR62Q9BZJ7 368 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 ULBP1Q9BZM6 244 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 DCLK3Q9C098 648 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 DDX47Q9H0S4 455 aaKnown RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 RC3H2Q9HBD1 1191 aaKnown RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 EPB41L5Q9HCM4 733 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 AAASQ9NRG9 546 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 CHST7Q9NS84 486 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 TMLHEQ9NVH6 421 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 IL37Q9NZH6 218 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 DMGDHQ9UI17 866 aaKnown RBP10.22□□□□□ -0.77
POLR1A-202ENST00000409024 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
POLR1A-202ENST00000409024 TNFRSF10BO14763 440 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 CAPN9O14815 690 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 RTN3O95197 1032 aaPredicted RBP10.21□□□□□ -0.77
POLR1A-202ENST00000409024 ECEL1O95672 775 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 GAS8O95995 478 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 SOD2P04179 222 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 CSF2RAP15509 400 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 GRIK1P39086 918 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 PTGIRP43119 386 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 PSEN1P49768 467 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 HDAC4P56524 1084 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 WDR5P61964 334 aaKnown RBP10.21□□□□□ -0.77
POLR1A-202ENST00000409024 RPL10AP62906 217 aaKnown RBP10.21□□□□□ -0.77
POLR1A-202ENST00000409024 GUCY2DQ02846 1103 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 CREMQ03060 361 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 MTA1Q13330 715 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 TAF5Q15542 800 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 DPYSL2Q16555 572 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 SLC39A12Q504Y0 691 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 ACBD5Q5T8D3 534 aaPredicted RBP10.21□□□□□ -0.77
POLR1A-202ENST00000409024 SLC8B1Q6J4K2 584 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 AADACL2Q6P093 401 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 CYP4V2Q6ZWL3 525 aaPredicted RBP10.21□□□□□ -0.77
POLR1A-202ENST00000409024 HDXQ7Z353 690 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 CCDC105Q8IYK2 499 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 DEFB106AQ8N104 65 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 NUP93Q8N1F7 819 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 SLC39A11Q8N1S5 342 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 BBOF1Q8ND07 529 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 RAPGEF5Q92565 580 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 NKD2Q969F2 451 aaPredicted RBP10.21□□□□□ -0.77
POLR1A-202ENST00000409024 CAVIN3Q969G5 261 aa10.21□□□□□ -0.77
POLR1A-202ENST00000409024 NTAN1Q96AB6 310 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms