RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 LILRA4P59901 499 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 KRTAP10-10P60014 251 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 KRTAP10-3P60369 221 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CNBPP62633 177 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 UBA52P62987 128 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PITX1P78337 314 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 LSM11P83369 360 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CDK17Q00537 523 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TFAP4Q01664 338 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 OCRLQ01968 901 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 MEF2BQ02080 365 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PPATQ06203 517 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ZNF33AQ06730 810 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 EHHADHQ08426 723 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 MGAT3Q09327 533 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 DBPQ10586 325 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CDC20Q12834 499 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 USP4Q13107 963 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 SRSF9Q13242 221 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 MAMLD1Q13495 774 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ITGA7Q13683 1181 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TOB2Q14106 344 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 HABP2Q14520 560 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ZNF235Q14590 738 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 HLXQ14774 488 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CA9Q16790 459 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PFKFB3Q16875 520 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CR1LQ2VPA4 569 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 EDRF1Q3B7T1 1238 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 KRTAP19-2Q3LHN2 52 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 LRRC24Q50LG9 513 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TMEM177Q53S58 311 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PRRT3Q5FWE3 981 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 MDH1BQ5I0G3 518 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PLEKHS1Q5SXH7 462 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 FKBP15Q5T1M5 1219 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 LCE1BQ5T7P3 118 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 RC3H1Q5TC82 1133 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TBC1D9BQ66K14 1250 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ANKS6Q68DC2 871 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 MCTP1Q6DN14 999 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ALKBH2Q6NS38 261 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 C16orf46Q6P387 395 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 IGF2-ASQ6U949 168 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 C6orf15Q6UXA7 325 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 DPP8Q6V1X1 898 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 SYT10Q6XYQ8 523 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 C19orf35Q6ZS72 473 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TRILQ7L0X0 811 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TRIM46Q7Z4K8 759 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 GPR142Q7Z601 462 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 FBXO33Q7Z6M2 555 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PLEKHH3Q7Z736 793 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 GPR149Q86SP6 731 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ADGRA1Q86SQ6 560 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CABP7Q86V35 215 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 KCNMB4Q86W47 210 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TTC30AQ86WT1 665 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ZFAND4Q86XD8 727 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 KIAA0825Q8IV33 1275 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 DND1Q8IYX4 353 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 RGL4Q8IZJ4 473 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 Q8N3U1 123 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 D2HGDHQ8N465 521 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TAB3Q8N5C8 712 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 MEIOBQ8N635 442 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PCSK9Q8NBP7 692 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 Q8NDZ9 215 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TDRD7Q8NHU6 1098 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PPTC7Q8NI37 304 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 SLC7A14Q8TBB6 771 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 GRHL3Q8TE85 626 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 SMAP2Q8WU79 429 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 RFFLQ8WZ73 363 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PIGBQ92521 554 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 NECTIN2Q92692 538 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 USP13Q92995 863 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 P2RX5Q93086 422 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 GJA10Q969M2 543 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PIGTQ969N2 578 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 SNX21Q969T3 373 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PNPLA2Q96AD5 504 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ZBTB10Q96DT7 871 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 TIMD4Q96H15 378 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ZNF385AQ96PM9 386 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 DUX5Q96PT3 197 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 WRNIP1Q96S55 665 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 FAM129BQ96TA1 746 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CCL19Q99731 98 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PIP5K1AQ99755 562 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 C16orf70Q9BSU1 422 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PHF20Q9BVI0 1012 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 PLVAPQ9BX97 442 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 IFIH1Q9BYX4 1025 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 CELF4Q9BZC1 486 aaKnown RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 BHLHE41Q9C0J9 482 aaPredicted RBP0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 HAPLN2Q9GZV7 340 aa0.04□□□□□ -2.4
RNU6ATAC11P-201ENST00000408541 ILKAPQ9H0C8 392 aaPredicted RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms