RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 MRPL45Q9BRJ2 306 aaKnown RBP17.22■□□□□ 0.35
COL23A1-202ENST00000407622 SNRNP25Q9BV90 132 aaKnown RBP17.22■□□□□ 0.35
COL23A1-202ENST00000407622 TSSK1BQ9BXA7 367 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 B3GNT5Q9BYG0 378 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 UGT1A7Q9HAW7 530 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 UGT1A10Q9HAW8 530 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 UGT1A8Q9HAW9 530 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 KCNK13Q9HB14 408 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 SMYD2Q9NRG4 433 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 RNF19AQ9NV58 838 aa17.22■□□□□ 0.35
COL23A1-202ENST00000407622 HCRTO43612 131 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 PEX11AO75192 247 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 TROVE2P10155 538 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL23A1-202ENST00000407622 P4HA1P13674 534 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 ATXN1P54253 815 aaKnown RBP17.21■□□□□ 0.35
COL23A1-202ENST00000407622 TTLL4Q14679 1199 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 ACOT1Q86TX2 421 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 SCUBE3Q8IX30 993 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 CTAGE3PQ8IX95 158 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 NT5C1AQ9BXI3 368 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 POPDC2Q9HBU9 364 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 FBXO6Q9NRD1 293 aaPredicted RBP17.21■□□□□ 0.35
COL23A1-202ENST00000407622 IKBKGQ9Y6K9 419 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 TRIM49D1C9J1S8 452 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 KIF12Q96FN5 646 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 ARL8BQ9NVJ2 186 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 HEY2Q9UBP5 337 aa17.21■□□□□ 0.35
COL23A1-202ENST00000407622 APOL1O14791 398 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 TSPAN1O60635 241 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 WFS1O76024 890 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 APRTP07741 180 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CDC25CP30307 473 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CLNS1AP54105 237 aaKnown RBP17.2■□□□□ 0.34
COL23A1-202ENST00000407622 BCAR1P56945 870 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 PRKD1Q15139 912 aaPredicted RBP17.2■□□□□ 0.34
COL23A1-202ENST00000407622 PPP6R3Q5H9R7 873 aaPredicted RBP17.2■□□□□ 0.34
COL23A1-202ENST00000407622 TTC8Q8TAM2 541 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CLEC4CQ8WTT0 213 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 MECRQ9BV79 373 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CNTN3Q9P232 1028 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 PAK5Q9P286 719 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ITGA11Q9UKX5 1188 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 PLXNA1Q9UIW2 1896 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 PAPSS1O43252 624 aaPredicted RBP17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ZBED1O96006 694 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 RBP5P82980 135 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 BMPR2Q13873 1038 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 PKDCCQ504Y2 493 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ZNF484Q5JVG2 852 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CES4AQ5XG92 561 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CHSY1Q86X52 802 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ZNF398Q8TD17 642 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 NLRP7Q8WX94 980 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 RTP4Q96DX8 246 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 TMEM120AQ9BXJ8 343 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 TRIM55Q9BYV6 548 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 MIS12Q9H081 205 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ZNF408Q9H9D4 720 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 ZC3H7BQ9UGR2 993 aaKnown RBP17.2■□□□□ 0.34
COL23A1-202ENST00000407622 NR2E3Q9Y5X4 410 aa17.2■□□□□ 0.34
COL23A1-202ENST00000407622 CFAP69A5D8W1 941 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 TRAFD1O14545 582 aaPredicted RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ECM2O94769 699 aaPredicted RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SERPINB3P29508 390 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 GJA5P36382 358 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 HDAC4P56524 1084 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ANKRD20A2Q5SQ80 823 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ANKRD20A1Q5TYW2 823 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ANKRD20A3Q5VUR7 823 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SLC9A4Q6AI14 798 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SMYD5Q6GMV2 418 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 RFWD3Q6PCD5 774 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 TTC7BQ86TV6 843 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SLC26A11Q86WA9 606 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 IFNLR1Q8IU57 520 aaPredicted RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 RSRC1Q96IZ7 334 aaKnown RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SRPK1Q96SB4 655 aaKnown RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 DENND2DQ9H6A0 471 aaPredicted RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SLC5A4Q9NY91 659 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ENTPD5O75356 428 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 METTL18O95568 372 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 DLDP09622 509 aaKnown RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 PTPN4P29074 926 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SERPINB4P48594 390 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 GBE1Q04446 702 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 POU5F1BQ06416 359 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SLC10A2Q12908 348 aaPredicted RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 PDK2Q15119 407 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 TRMT10BQ6PF06 316 aaKnown RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ZNF534Q76KX8 674 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 MPP5Q8N3R9 675 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 AFG1LQ8WV93 481 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 SLC10A4Q96EP9 437 aa17.19■□□□□ 0.34
COL23A1-202ENST00000407622 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
COL23A1-202ENST00000407622 RNPEPL1Q9HAU8 725 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms